Query= MSMg01no063_d02.b1 MSMg01no063_d02.b1 CHROMAT_FILE:
MSMg01no063_d02.b1 PHD_FILE: MSMg01no063_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:28 2005
(239 letters)
>mm_chr6_84927760_84928398
Length = 639
Score = 453 bits (234), Expect = e-132
Identities = 237/238 (99%)
Strand = Plus / Plus
Query: 1 tgaactgacagaaggaagacatagctgagacatagctagaagcaacaatgccgactgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaactgacagaaggaagacatagctgagacatagctagaagcaacaatgccgactgggg 260
Query: 61 aatgaatcacctcactcaagactggactaacaagccatgaagaatggaggacacacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaatcacctcactcaagactggactaacaagccatgaagaatggaggacacacacag 320
Query: 121 taaagaagaaatatattcaaagagaatcataagttcaaagccatcagccctacttagagg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggaagaaatatattcaaagagaatcataagttcaaagccatcagccctacttagagg 380
Query: 181 ccctaactttcattataacaatggttaagaggaaagaaaaagggacaatttcttccta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctaactttcattataacaatggttaagaggaaagaaaaagggacaatttcttccta 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_d02.g1 MSMg01no063_d02.g1 CHROMAT_FILE:
MSMg01no063_d02.g1 PHD_FILE: MSMg01no063_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:28 2005
(243 letters)
>mm_chr6_85093441_85094082
Length = 642
Score = 340 bits (176), Expect = 3e-98
Identities = 226/244 (92%), Gaps = 5/244 (2%)
Strand = Plus / Plus
Query: 2 aggagctcagtttaagaaagagcacgtgagacctgcctgactggactttgttcacgtaca 61
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 202 aggagctcagtttaagaaagagcacgtgacacctgcctgactggaatttgttcacgtaca 261
Query: 62 agaagagacagagacacacacaatgagagcgagcctcaccaggggttccatgtcccagtt 121
|||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||
Sbjct: 262 agaagagacagagacacacaca--gagagcgagcttcaccaggggttccatatcccagtg 319
Query: 122 ccggatggtgaggaatcatcagga--tgatgccagctctgcaacccaggccggcccagag 179
|| ||| ||||||| ||||||||| ||| ||||||||| |||||||||| |||| ||||
Sbjct: 320 cctgatcgtgaggattcatcaggacatgaggccagctctccaacccaggctggcc-agag 378
Query: 180 cctccgtgaagtcctccttggttttgtctgcttagctagcctggtccagtggctgcagcc 239
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 cctctgtgaagtcctccttggttttttctgcttagctagcctggtccagtggctgcagcc 438
Query: 240 agca 243
||||
Sbjct: 439 agca 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
