CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAAT
TCATAAATATGCCTCACCCACGCACACTACATGCACTTGAAAAGCAGAAC
TCCTGGGGAGATACTTGTGTCAGGCCCTACCAGCTGGATTTTTGCAAAGG
GTAGACACATTCAGTCATTGTAGCTTCGACTCCGAATAAGTCAAACGTAC
CTCTGGCCTGCTTTTCCATTCTCTATTAAGAAACAACAAAGGCAGGGATG
AAGTTTCTGGGGTCAGTGATGTAATATCAGGAATGCACTCCCCTGTCAGG
CCCTGCCCCAGTGCAGTGTGCACCACCCCTCAGCAGAGAGATGGGTGAGT
AACTCTGGGCACTCTTTACCCTGATGGTAAAACTGATCTCAAAGCAGTGT
TCTCAAACACAAATGGTGTATCCCTCTGCAAGTTCTGACCCAGCATTGCT
TCCCTGGGTTCGTCAAGTGCTAATGGACCTTTTTGCTTCTCACCCTCTCG
TTTACATACTTGTTACCCAGAAAGGATAATAGTGTTCAAGCACTTTAAGT
GATAGGAAACATTACTCCAGATTAGTCAAGATAAGAGGCACACCCATCAT
TCTTCACTCAAAAAATGGGTTGTGGGCAATTCTGAGAATTCTCTGCTCTC
TGCCTGTTCTTGTATTCTACTTCCCGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXAGGTTTAGAAGCAGGAGCTGATACAGAGGCCATGGAGGGA
TAATTCTTACTGGCTTGCTTCCTTTGACTTGCTCAGCTTGTTTTCTTATA
GAACCCAACACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCC
CACCCTTGATCACTAGTTGAGACAATGCCTTACAGCTGGATTTCATGGAG
GCATTTCCTCAACTGAAGATCCCTTATCTGTGATAACTCCAGCTTGTGTC
AAGTTGACACAAAAACCTAGTCAGTACACTAAGTAACAAGGAGAGGACAA
GGAGGACACATGAATCTCATTCAGAAGGGTAAATAATCATTGGAGGTGAA
TGGAGGGAGGAAACATGTAGGAGAGAGGATGGGGAGTGTAACAGGATGTA
ATCAAGCGCAGCGAAAGATTGTAGGCACAAACCTGGTACAATGCTCCCCT
ATCCCTTGCATCGCTCTTTCAATCCCTGTTACACTTTAACAATTCTTTAT
CATCCCCTCTCCCCATTACCCTACGTCCGCCGTCCCCCACTCTTTTTACT
CCCCCCCCTTTCACTATTAAATTCCCACTATCTACCCTCCCTTTTTCCCA
TTTCTACCCCCTATCTGCCCCCCCT

Query= MSMg01no063_j07.b1 MSMg01no063_j07.b1 CHROMAT_FILE:
MSMg01no063_j07.b1 PHD_FILE: MSMg01no063_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:00 2005
         (563 letters)



>mm_chr6_15742691_15743653
          Length = 963

 Score = 1000 bits (517), Expect = 0.0
 Identities = 547/557 (98%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcataaatatgcctcacccacgcacactacatgcacttgaaaagcagaactcctgg 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcataaatatgcctcacccacgcacactacatgcacttgaaaagcagaactcctgg 266

                                                                       
Query: 67  ggagatacttgtgtcaggccctaccagctggatttttgcaaagggtagacacattcagtc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggagatacttgtgtcaggccctaccagctggatttttgcaaagggtagacacattcagtc 326

                                                                       
Query: 127 attgtagcttcgactccgaataagtcaaacgtacctctggcctgcttttccattctctat 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attgtagcttcgactccgaataagtcaaacgtacctctggcctgcttttccattctctat 386

                                                                       
Query: 187 taagaaacaacaaaggcagggatgaagtttctggggtcagtgatgtaatatcaggaatgc 246
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 387 taagaaacaacaaaggcagggatgaagtttctggggtcagtgatgtaatatcagaaatgc 446

                                                                       
Query: 247 actcccctgtcaggccctgccccagtgcagtgtgcaccacccctcagcagagagatgggt 306
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 447 actcccctgtcaggccctgccccagtgcagtgtacaccacccctcagcagagagatgtgt 506

                                                                       
Query: 307 gagtaactctgggcactctttaccctgatggtaaaactgatctcaaagcagtgttctcaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gagtaactctgggcactctttaccctgatggtaaaactgatctcaaagcagtgttctcaa 566

                                                                       
Query: 367 acacaaatggtgtatccctctgcaagttctgacccagcattgcttccctgggttcgtcaa 426
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acactaatggtgtatccctctgcaagttctgacccagcattgcttccctgggttcgtcaa 626

                                                                       
Query: 427 gtgctaatggacctttttgcttctcaccctctcgtttacatacttgttacccagaaagga 486
           ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 627 gtgctaatggatctttttgcttctcactctctcgtttacatactcgttacccagaaagga 686

                                                                       
Query: 487 taatagtgttcaagcactttaagtgataggaaacattactccagattagtcaagataaga 546
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 687 aaatagtgttcaagcactttaagtcataggaaacattactccagattagtcaagataaga 746

                            
Query: 547 ggcacacccatcattct 563
           ||||||| |||||||||
Sbjct: 747 ggcacacacatcattct 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)