Query= MSMg01no065_d10.b1 MSMg01no065_d10.b1 CHROMAT_FILE:
MSMg01no065_d10.b1 PHD_FILE: MSMg01no065_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:39 2005
(268 letters)
>mm_chr6_86656415_86657082
Length = 668
Score = 497 bits (257), Expect = e-145
Identities = 263/265 (99%)
Strand = Plus / Minus
Query: 4 gaattctgcctgttgccctcaagtgctgctgttgtctgggcctcaagtgctgctgttgtc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gaattctgcctgttggcctcaagtgctgctgttgtctgggcctcaagtgctgctgttgtc 409
Query: 64 tggcacgcagcagacaggattctagatggcagtgttttcatctcatctgactgccatgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tggcacgcagcagacaggattctagatggcagtgttttcatctcatctgactgccatgac 349
Query: 124 tttttaaactgatacatttagaaggtgtgatttttatatttatgtacgacaaagctcatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tttttaaactgatacatttagaaggtgtgatttttatatttatgtacgacaaagctcatc 289
Query: 184 ttcatagtgtggtatgtagcagtattatggttactacatagattttgaaggtatttccat 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttcatagtgtggtatgtggcagtattatggttactacatagattttgaaggtatttccat 229
Query: 244 tatgcttacagctgcacaaaagaag 268
|||||||||||||||||||||||||
Sbjct: 228 tatgcttacagctgcacaaaagaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_d10.g1 MSMg01no065_d10.g1 CHROMAT_FILE:
MSMg01no065_d10.g1 PHD_FILE: MSMg01no065_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:39 2005
(453 letters)
>mm_chr6_86494641_86495492
Length = 852
Score = 861 bits (445), Expect = 0.0
Identities = 451/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 1 ctggtccttctgcctcagcctccctagtactgggaatataggcatgtatcatcatgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtccttctgcctcagcctccctagtactgggaatataggcatgtatcatcatgtctg 260
Query: 61 atttatttccttataatatttttctcattggcaaaatatttctcttttatttttttgaga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 atttatttccttataatatttttctcattggcaaaatatttctctttt-tttttttgaga 319
Query: 121 catggttggttctgctgcctagactctacagtcttgtcttagctactaagtacatgggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catggttggttctgctgcctagactctacagtcttgtcttagctactaagtacatgggat 379
Query: 181 cactgtgacgtcaggctctgttttttattttgacttgaaatttagttgagatgtctcatt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 cactgtgacgtcaggctctgttttttgttttgacttgaaatttagttgagatgtctcatt 439
Query: 241 agttttaggctagcctggaagcccacagtattagttcatctttcacaggcagctttagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agttttaggctagcctggaagcccacagtattagttcatctttcacaggcagctttagct 499
Query: 301 ctctcacctctaagaactttgcagccacagctaaacaaatgtgtgtcacttcttatcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctcacctctaagaactttgcagccacagctaaacaaatgtgtgtcacttcttatcatt 559
Query: 361 atttaagtgcaaagccttttccaccgtggagaatgaatcttagggtatgaagtcctcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttaagtgcaaagccttttccaccgtggagaatgaatcttagggtatgaagtcctcagc 619
Query: 421 ttggaaaatgaatggaggtggagcctcttccat 453
|||||||||||||||||||||||||||||||||
Sbjct: 620 ttggaaaatgaatggaggtggagcctcttccat 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
