Query= MSMg01no065_e02.b1 MSMg01no065_e02.b1 CHROMAT_FILE:
MSMg01no065_e02.b1 PHD_FILE: MSMg01no065_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:42 2005
(382 letters)
>mm_chr6_23515794_23516576
Length = 783
Score = 669 bits (346), Expect = 0.0
Identities = 370/378 (97%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 6 gaattcctccaggttcccgccttgagt-ctcaattcatctgcctttgtcacaaattgggt 64
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 474 gaattcctccaggttcctgccttgagtagtcaattcatctgcctttgtcacaaattgggt 415
Query: 65 atgcttttgtggaaggacacatcaatatatttatcctgactaaatgcgatcccccagttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atgcttttgtggaaggacacatcaatatatttatcctgactaaatgcgatcccccagttg 355
Query: 125 cagttttgactcatccaaagttataaacatgtgaaacacatttggctgattaatgtttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 354 cagttttgactcatccaaagttataaacatgtgaaacacatttggctgattgatgtttat 295
Query: 185 gaaatcaattaacaatattaaaaatgaatttggaagtaaactgtgtcggaatattctctg 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 294 gaaatcaattaacaatattaaaaatgaatttggaagtaaactgtgtcgtaatattctctg 235
Query: 245 tagcatttcaactgtacatgtggattattcctctactcccagcatgtaggaagtataaac 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 234 tagcatttcaactggacatgtggattattcctctactcccagcatgtaggaagtagaaac 175
Query: 305 aagaggatcaagagccacactgtacatgtcaactttatagtgacttggaagccattctgg 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aagaggatcaagagccacaccgtacatgtcaactttatagtgacttggaagccattctgg 115
Query: 365 gctgcaggaaacttggct 382
||||||||||||||||||
Sbjct: 114 gctgcaggaaacttggct 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 783
Length adjustment: 9
Effective length of query: 373
Effective length of database: 774
Effective search space: 288702
Effective search space used: 288702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_e02.g1 MSMg01no065_e02.g1 CHROMAT_FILE:
MSMg01no065_e02.g1 PHD_FILE: MSMg01no065_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:42 2005
(353 letters)
>mm_chr6_23423852_23424604
Length = 753
Score = 232 bits (120), Expect = 2e-65
Identities = 129/132 (97%)
Strand = Plus / Plus
Query: 2 ttttaaaaaaaattattacaatgtctttcatttgtatgcatgtgaggtggacgattcaat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttaaaaaaaattattacaatgtctttcatttgtatgcatgtgaggtggacgattcaat 261
Query: 62 gtgcatagcggccattggtcaatttcctgtgtcattctttaggagtcacccacataattt 121
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtgaatagaagccattggtcaatttcctgtgtcattctttaggagtcacccacataattt 321
Query: 122 ggttttaaaaat 133
||||||||||||
Sbjct: 322 ggttttaaaaat 333
Score = 147 bits (76), Expect = 9e-40
Identities = 85/88 (96%)
Strand = Plus / Minus
Query: 266 gcaaccctataggtggaacaacattatgaactaaccagtaccccggagctcttgactcta 325
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 753 gcaaccctataggtggaacaacattatgagctaaccagtaccccggagctcttgactcta 694
Query: 326 gctgcatatgtatcaaaagatggcctag 353
|||| |||| ||||||||||||||||||
Sbjct: 693 gctgtatatatatcaaaagatggcctag 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
