Query= MSMg01no066_l02.b1 MSMg01no066_l02.b1 CHROMAT_FILE:
MSMg01no066_l02.b1 PHD_FILE: MSMg01no066_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:34 2005
(457 letters)
>mm_chr6_19782598_19783458
Length = 861
Score = 783 bits (405), Expect = 0.0
Identities = 432/443 (97%), Gaps = 4/443 (0%)
Strand = Plus / Minus
Query: 1 agatacaccacacacctataactcagtagagttataagttagcactgttcagccctagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agatacaccacacacctataactcagtagagttataagttagcactgttcagccctagtc 384
Query: 61 cctctgttttctatatggaggtatggttgtatatggtgcagcaaacatgacacctaaagc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 383 cctctgttttctatatggaggtatggttgcatatggtgcagcaaacatgacacctaaagc 324
Query: 121 cacaaagcactgcatttactgttagatgtcaataactcttctggctgaaatgaagacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cacaaagcactgcatttactgttagatgtcaataactcttctggctgaaatgaagacata 264
Query: 181 ct----gacctgaagggtcattggccatcagaaccacagaccactcagacaagacatata 236
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctactagacctgaagggtcattggccatcagaaccacagaccactcagacaagacatata 204
Query: 237 taggggaaacagaaatcaaagaggaaaacaactaagaatcacccatccaacaaagataaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 taggggaaacagaaatcaaagaggaaaacaactaagaatcacccatccaacaaagataaa 144
Query: 297 ctcagaaactggcatccaatccaataataacccccaaaccagatgatgaggggctaacat 356
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 143 ctcagaaactggcatccaatccaataataatccccaaaccagatgatgaggggctaacat 84
Query: 357 acgaacacaataaaaaatacctaataaaatatggaccagcagaacccagttatcctgctg 416
| |||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 83 aagaacccaataaaaaatacctaagaaaatatgtaccagcagaacccagctatcctgctg 24
Query: 417 gagcaagatctggatattctaac 439
|||||||||||||||||||||||
Sbjct: 23 gagcaagatctggatattctaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 861
Length adjustment: 10
Effective length of query: 447
Effective length of database: 851
Effective search space: 380397
Effective search space used: 380397
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_l02.g1 MSMg01no066_l02.g1 CHROMAT_FILE:
MSMg01no066_l02.g1 PHD_FILE: MSMg01no066_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:34 2005
(360 letters)
>mm_chr6_19715128_19715887
Length = 760
Score = 673 bits (348), Expect = 0.0
Identities = 357/360 (99%)
Strand = Plus / Plus
Query: 1 caagatctgagatgttttatttttgtaattagtaaacattgggtatagataccgaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagatctgagatgttttatttttgtaattagtaaacattgggtatagataccgaaagaa 260
Query: 61 ttaatgatgcatatagatataaaatatgaagaaataatattgtacgcatgaggtgttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatgatgcatatagatataaaatatgaagaaataatattgtacgcatgaggtgttaaa 320
Query: 121 tactgtgtgttgctgaatataattaccattgttcatagattggagccttagacgttatcc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 321 tactgtgtgttgctgaatataattaccattgttcatagattggagtcttagacattatct 380
Query: 181 ttttctttctcttattgttttgattaatataaactaattatatacagactttacatcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttctttctcttattgttttgattaatataaactaattatatacagactttacatcaaa 440
Query: 241 tcacacctccattttcagataattttgctccaggagatggcactgtagtgctttgtttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacacctccattttcagataattttgctccaggagatggcactgtagtgctttgtttta 500
Query: 301 tagtgcagataccaaatctgtaagccacaggttattttcacaatgtgttgataatctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtgcagataccaaatctgtaagccacaggttattttcacaatgtgttgataatctgag 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
