Query= MSMg01no068_a04.b1 MSMg01no068_a04.b1 CHROMAT_FILE:
MSMg01no068_a04.b1 PHD_FILE: MSMg01no068_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:17 2005
(141 letters)
>mm_chr6_8547429_8547969
Length = 541
Score = 269 bits (139), Expect = 5e-77
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 1 ttggtgctcactgagttcctaccctgaagaactagagctgtggggagtcttaattggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggtgctcactgagttcctaccctgaagaactagagctgtggggagtcttaattggatc 260
Query: 61 agatttctccactttggtttcctcttgacacttaatttgcacactttgcatcctaggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatttctccactttggtttcctcttgacacttaatttgcacactttgcatcctaggtaa 320
Query: 121 caagttggatgtttggagt 139
|||||||||||||||||||
Sbjct: 321 caagttggatgtttggagt 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_a04.g1 MSMg01no068_a04.g1 CHROMAT_FILE:
MSMg01no068_a04.g1 PHD_FILE: MSMg01no068_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:17 2005
(304 letters)
>mm_chr6_8717747_8718450
Length = 704
Score = 493 bits (255), Expect = e-144
Identities = 294/309 (95%), Gaps = 6/309 (1%)
Strand = Plus / Minus
Query: 1 tcacttagggtcagccattggaagcagggctgcatcaggagagcggagtgaggcctgtat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 464 tcacttagggtcagccattggaagcagggctgcagcaggagagcggagtgaggcctgtat 405
Query: 61 tgaccccttatgaacactttgaattttctggtttatttttacctgttttccagtgtccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgaccccttatgaacactttgaattttctggtttatttttacctgttttccagtgtccct 345
Query: 121 tcttgtgaatctgaccgtggacctcaacttagatgagttgatgagttaccttcaattttg 180
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 344 tcttgtgaatctgaccttggacctcaacttagatgaattgatgagttaccttcaattttg 285
Query: 181 gaacctagttatttcatctcaaaacaaaagatgtgcagtg-ctctatctctagacttctg 239
||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 284 gaaactagttatttcatctcaaaacaaaagatgtacagtgtc-ctatctctagacttctg 226
Query: 240 tgaaagagaatatcctc----ttttttttaagttcacattttaaaaaacatttttattat 295
||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 225 tgaaagagaatatcctcttttttttttttaagttcacattttttaaagcatttttattag 166
Query: 296 atattttct 304
|||||||||
Sbjct: 165 atattttct 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
