XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGTAATCCGCGGAATTCCTC
TTGGATATCTTAAAGTTGATGAGTATGAAGTGTCCCTCTTTGTCTTTTTT
GATAACTTTGGGTTGGAAGTCACTTTTATTTGATATTAGAATGTCTACTC
CAGCCTGTTTCTTCAGATCATTTGCTTGGAAAATTGTTTTCCAGCTTTTC
AGTCTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGGGTTTCCGGTAAGCA
GCAGAATGTTGGGTCCTGTTTGTGTAGCCATTCTTTTAGTCTATGTCTTT
TTATTGGGGAATTGTTTTTATTGATAGTAAGAGATATTAAGGAAAAGTAA
TTGTTGCTTCCTATTATTTTTGTTTTTAGAGTTGACATTCTGTTCTTCTG
GCTGTCTTCTTTTTGGTTTGTTGAGGGATTACTTTCTTGCTTTTTCTAGG
GTGTTGTTTCCATCTTTGTATTGTTTTTTTTCTGTTATTATACTTTGAAG
GGCTGGATTCATGGAAAGATAATGTGTGAATTTGGTTTTGGAATACTTTG
GTTTCTCCATCTATGGTAATTGAGAGTTTGGCTGGGTATAGTAACCTGGC
CTGGCATTTGTGTTATCTTAGGGTCTGTATAACATCTGTCCAGGATCTTC
TGGCTTTCATAGTCTCTGGTGAAAAGTCTGGTGTTATTCTG

NTTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAGAACAGACCCACACACATGGC
CAGTCTTCATGAAGTGTGCATATGTAATTGAAGTAAGTTCTTATTATTAG
TTCCTGCCCCTCTTTGTCTGATGGTTTCAATTTATAACAAAAGTGGAGGA
ATGTGCTTATCCCAATGATGTTAAAGCCACCAAAGTGAAATAGATCCATT
AGTACTTTCCAGATAAATGTTTGAGCTCTCTCATCATTCCTGTATAGAGA
AGTTAATCAGCCCCAGATTTGTGAACATGACTTCTCTGTTGGGAGGCACC
GAAGTACACAGCAACCAGTATTCCCTTCAGAGAATAGAATATCTATGATG
GCACAAGTTATTATCAGGACTCTGAGATTTATGACATAGCAAACTTTATT
GAAAACATGGTTCTATAAGTTAATGAATGTAAGCTAGGTGAATGTAAGTT
AACGAATGAAAGGAGGTGAAACTGGATGCCAGCTTACACAATGAAAAAGG
TAAAGGAAATAATTATTTACACAATCATAGGAAACACTTTGGAACAGTCA
GCTGCCCAAATCAAGATTCATTTTAGGAAAATAATAAGATATAAAATTCA
ATAGGAAAGAAATTAAGGAATCATATGTGATATTAAAGATTATGAACTCC
AGC

Query= MSMg01no068_f05.g1 MSMg01no068_f05.g1 CHROMAT_FILE:
MSMg01no068_f05.g1 PHD_FILE: MSMg01no068_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:44 2005
         (585 letters)



>mm_chr6_10017857_10018841
          Length = 985

 Score = 1123 bits (581), Expect = 0.0
 Identities = 584/585 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atagaacagacccacacacatggccagtcttcatgaagtgtgcatatgtaattgaagtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 atagaacagacccacacacatggccagtcttcatgaagtgtgcatatgtaattgaagtaa 726

                                                                       
Query: 61  gttcttattattagttcctgcccctctttgtctgatggtttcaatttataacaaaagtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gttcttattattagttcctgcccctctttgtctgatggtttcaatttataacaaaagtgg 666

                                                                       
Query: 121 aggaatgtgcttatcccaatgatgttaaagccaccaaagtgaaatagatccattagtact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aggaatgtgcttatcccaatgatgttaaagccaccaaagtgaaatagatccattagtact 606

                                                                       
Query: 181 ttccagataaatgtttgagctctctcatcattcctgtatagagaagttaatcagccccag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttccagataaatgtttgagctctctcatcattcctgtatagagaagttaatcagccccag 546

                                                                       
Query: 241 atttgtgaacatgacttctctgttgggaggcaccgaagtacacagcaaccagtattccct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atttgtgaacatgacttctctgttgggaggcaccgaagtacacagcaaccagtattccct 486

                                                                       
Query: 301 tcagagaatagaatatctatgatggcacaagttattatcaggactctgagatttatgaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcagagaatagaatatctatgatggcacaagttattatcaggactctgagatttatgaca 426

                                                                       
Query: 361 tagcaaactttattgaaaacatggttctataagttaatgaatgtaagctaggtgaatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tagcaaactttattgaaaacatggttctataagttaatgaatgtaagctaggtgaatgta 366

                                                                       
Query: 421 agttaacgaatgaaaggaggtgaaactggatgccagcttacacaatgaaaaaggtaaagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agttaacgaatgaaaggaggtgaaactggatgccagcttacacaatgaaaaaggtaaagg 306

                                                                       
Query: 481 aaataattatttacacaatcataggaaacactttggaacagtcagctgcccaaatcaaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaataattatttacacaatcataggaaacactttggaacagtcagctgcccaaatcaaga 246

                                                        
Query: 541 ttcattttaggaaaataataagatataaaattcaataggaaagaa 585
           ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 245 ttcattttaggaaaataataagatataaaattcaacaggaaagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)