Query= MSMg01no068_n07.b1 MSMg01no068_n07.b1 CHROMAT_FILE:
MSMg01no068_n07.b1 PHD_FILE: MSMg01no068_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:24 2005
(442 letters)
>mm_chr6_77506070_77506915
Length = 846
Score = 820 bits (424), Expect = 0.0
Identities = 439/446 (98%), Gaps = 4/446 (0%)
Strand = Plus / Minus
Query: 1 ccagaaagttgggattgcctttgaatggaacacaatttaacatcaaaccacttgaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ccagaaagttgggattgcctttgaatggaacacaatttaacatcaaaccacttgaaaaag 587
Query: 61 gctttatgtgttcctatgcctatcaaatagagggccacgtgctctcccgactgatgagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gctttatgtgttcctatgcctatcaaatagagggccacgtgctctcccgactgatgagtg 527
Query: 121 gctcctgactgatctcagaaacccacctcctgatttctcctacctttctcatttacactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gctcctgactgatctcagaaacccacctcctgatttctcctacctttctcatttacactg 467
Query: 181 gattgctctagccctctgcccagaatcagcatctccatcctgatttcatttattctgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gattgctctagccctctgcccagaatcagcatctccatcctgatttcatttattctgtat 407
Query: 241 gatacaacagtccacagcatgggtacctcattttgcacagagcaactaaaactcaccgaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 406 gatacaacagtccacagcatgggtacctcattttgcacagagcaactaaaactcacagaa 347
Query: 301 tttaacgtactgctttgtgcttcctgtgcagctgagtaagtcttgtaataacccagaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttaacgtactgctttgtgcttcctgtgcagctgagtaagtcttgtaataacccagaggg 287
Query: 361 aaaagttcacttccttatctaacaaaggctatcacttactccttttaatcaactattaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 286 aaaagttcacttccttatctaacaaaggctatcacttactccttttaaccaactattaaa 227
Query: 421 a----aaattatttaccattttttga 442
| |||||||||||||| ||||||
Sbjct: 226 agaaaaaattatttaccatgttttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 846
Length adjustment: 10
Effective length of query: 432
Effective length of database: 836
Effective search space: 361152
Effective search space used: 361152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_n07.g1 MSMg01no068_n07.g1 CHROMAT_FILE:
MSMg01no068_n07.g1 PHD_FILE: MSMg01no068_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:24 2005
(293 letters)
>mm_chr6_77326150_77326842
Length = 693
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Plus
Query: 1 agaagaagacatcagattctcaggggctggagttacacttgctgagtacagtttgtgagc 60
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagaaggcatcagattctcaagggctggagttacacttgctgagtacagtttgtgagc 260
Query: 61 tgctcattttgggtgttaggcatcaaagttagatctcctggaaaagcgctgcaggaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctcattttgggtgttaggcatcaaagttagatctcctggaaaagcgctgcaggaaggg 320
Query: 121 ctaattttgacatttgtcttctaaagcatcacagtgaagtgatgtttgcccaggaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaattttgacatttgtcttctaaagcatcacagtgaagtgatgtttgcccaggaaagag 380
Query: 181 atggaccgcacacaagtaaaacagtgaagttgctttttacctaattgattgatggctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggaccgcacacaagtaaaacagtgaagttgctttttacctaattgattgatggctcaa 440
Query: 241 ttttatattatttacagtttcatggaaagcttggagagtcacaagctata 290
|||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ttttatattagttacagtttcatgggaagcttggagagtcacaagctata 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
