Query= MSMg01no069_c24.b1 MSMg01no069_c24.b1 CHROMAT_FILE:
MSMg01no069_c24.b1 PHD_FILE: MSMg01no069_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:52 2005
(320 letters)
>mm_chr6_14734665_14735385
Length = 721
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcttcattctcgct-ccaagtttctactgcatttgtgatgattataataacct 62
||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||
Sbjct: 521 ggaattctcttcattctcgttcccaagtttccactgcatttgtgatgattataataacct 462
Query: 63 tcagagctgctttaggctcttaactcatcataaataaatgtactatttttgaaggttgga 122
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcagagctgctttagacttttaactcatcataaataaatgtactatttttgaaggttgga 402
Query: 123 catttttgatgtttatttttatgtgcataaaattgttatctctttctatatttcagggaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 catttttgatgtttatttttatgtgcataaaattgttatctctttctatatttcagggaa 342
Query: 183 acttttgaggcagagggctgcttgaccatgaacatatttatgcccctcatgaaaacacca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acttttgaggcagagggctgcttgaccatgaacatatttatgcccctcatgaaaacacca 282
Query: 243 gaggcacatccttcttacagtagacttggtggatgagttgaatcagtagcatagtctaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaggcacatccttcttacagtagacttggtggatgagttgaatcagtagcatagtctaca 222
Query: 303 gtgacactatcacagtat 320
||||||||||||||||||
Sbjct: 221 gtgacactatcacagtat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no069_c24.g1 MSMg01no069_c24.g1 CHROMAT_FILE:
MSMg01no069_c24.g1 PHD_FILE: MSMg01no069_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:52 2005
(291 letters)
>mm_chr6_14665373_14666063
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Plus
Query: 1 tgtttggggcaccggtgctcataaaatagtgtcctttacattacagagataccctatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tgtttggggcaccggtgctcataaaatagtgtcctttacattacagagataagctatgtt 260
Query: 61 gactaaaactcttaaaacatagaattaagaaaaacctctaagctataaagagctggtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactaaaactcttaaaacatagaattaagaaaaacctctaagctataaagagctggtgga 320
Query: 121 atgctaactttaactccaacttaacttagtcctgacaaaaaaatatgagggcaacaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctaactttaactccaacttaacttagtcctgacaaaaaaatatgagggcaacaattt 380
Query: 181 tagagataatttctaaggactgcttaaaggaattccacttgcatttgatagaagtatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagataatttctaaggactgcttaaaggaattccacttgcatttgatagaagtatgct 440
Query: 241 tctcaaaaagcaaatatttgacctgcattctacttcaggatgtttgcattt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcaaaaagcaaatatttgacctgcattctacttcaggatgtttgcattt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
