Query= MSMg01no070_b03.b1 MSMg01no070_b03.b1 CHROMAT_FILE:
MSMg01no070_b03.b1 PHD_FILE: MSMg01no070_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:00 2005
(377 letters)
>mm_chr6_90853827_90854602
Length = 776
Score = 661 bits (342), Expect = 0.0
Identities = 366/376 (97%), Gaps = 7/376 (1%)
Strand = Plus / Minus
Query: 2 ggaattctgggaaa-ttcatattaccctgtcgacaaaacttgaacgaacacacacacaca 60
|||||||||||||| | ||||||||||||||||||||||||||||| |||||||||
Sbjct: 675 ggaattctgggaaagtaaatattaccctgtcgacaaaacttgaacga----acacacaca 620
Query: 61 cacacacacacacacacacacacacacacacacacacacacactggctgcttcccttcaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 619 cacacacacacacacacacacacacacacacacacacacacact-gctgcttcccttcaa 561
Query: 121 gatgctgaaagctgtgactgtgacaagcatagggcatcttattacatcagcctccccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatgctgaaagctgtgactgtgacaagcatagggcatcttattacatcagcctccccatt 501
Query: 181 gtctcctctcctagatccttttccagtcagtagacaggaatgactcatggagctcaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtctcctctcctagatccttttccagtcagtagacaggaatgactcatggagctcaggac 441
Query: 241 taatcactgatgaagtggaagctccacagctcaagtttaagcttcagacactttgattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taatcactgatgaagtggaagctccacagctcaagtttaagcttcagacactttgattcc 381
Query: 301 taaccatgaagccttgagcaagcacacagcttcactgagaatcaacaacctgtccccccc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 taaccatgaagccttgagcaagcacacagcttcactgagaatcaacaacctgtcccccac 321
Query: 361 cccacccacccaataa 376
|| |||||||||||||
Sbjct: 320 cc-acccacccaataa 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 776
Length adjustment: 9
Effective length of query: 368
Effective length of database: 767
Effective search space: 282256
Effective search space used: 282256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_b03.g1 MSMg01no070_b03.g1 CHROMAT_FILE:
MSMg01no070_b03.g1 PHD_FILE: MSMg01no070_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:00 2005
(297 letters)
>mm_chr6_90709582_90710278
Length = 697
Score = 551 bits (285), Expect = e-161
Identities = 294/297 (98%)
Strand = Plus / Plus
Query: 1 ttctggccactgtggcctcatcaggatgctgcagtaggtaggttggggggcccagagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctggccactgtggcctcatcaggatgctgcagtaggtaggttggggggcccagagtac 260
Query: 61 agagccaaccacccagcaaggagaaggagcactatagcaaggcaagaggaagctgcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagccaaccacccagcaaggagaaggagcactatagcaaggcaagaggaagctgcaagt 320
Query: 121 gggaaagaggttccccttgtgaggcaggcacaacacaggatggaaagataacaggctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaagaggttccccttgtgaggcaggcacaacacaggatggaaagataacaggctcag 380
Query: 181 gtcctcctttgcgggggcaccagatggctgagtgtcccagcaagctcctgggacactttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcctcctttgcgggggcaccagatggctgagtgtcccagcaagctcctgggacactttc 440
Query: 241 aggggctatatgccatctgctcccagccctcctgctcagacacagctgcagcggagg 297
|||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 agggcctagatgccatctgctcccagccctcctgcacagacacagctgcagcggagg 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
