Query= MSMg01no072_p01.b1 MSMg01no072_p01.b1 CHROMAT_FILE:
MSMg01no072_p01.b1 PHD_FILE: MSMg01no072_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:51 2005
(417 letters)
>mm_chr6_4479025_4479838
Length = 814
Score = 731 bits (378), Expect = 0.0
Identities = 404/414 (97%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactttgagtaacatctcaatccattatctcctagatcgcaaacaatatcatct 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactttgagtaaaatctcaatccattatctcctagatcgcaaacaatatcatct 263
Query: 64 tacatgctccaaaagaaaatgggagcatgacacacctttgaaaatcacatcttgacttag 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacatactccaaaagaaaatgggagcatgacacacctttgaaaatcacatcttgacttag 323
Query: 124 tctacgttctttagtactgagtatggcaacactaagctgcacaccgaaagttgcaggttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctacgttctttagtactgagtatggcaacactaagctgcacaccgaaagttgcaggttt 383
Query: 184 tgaagaccactccttgaaaacagagcttttagacaaacaattctctcattaaaaaaaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagaccactccttgaaaacagagcttttagacaaacaattctctcattaaaaaaaaaa 443
Query: 244 aagccacagccaataccaccaaggtattactactcattggtccaccccaggaactgatct 303
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagccacagccc---ccaccaaggtattactactcattggtccaccccaggaactgatct 500
Query: 304 aagggcagcctcagaaattatctgtgactacctcaagtgtcacagatgacccctagggaa 363
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 aagggcagcctcggaaattatctgtgactaccttaagtgtcacagatgacccctagggaa 560
Query: 364 atctcattgccttcatgagctgccattgttctgtcacctctccctccaagctga 417
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 atctcattgccttcatgagctgccattactctgtcacctctccctccaagctga 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 814
Length adjustment: 9
Effective length of query: 408
Effective length of database: 805
Effective search space: 328440
Effective search space used: 328440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_p01.g1 MSMg01no072_p01.g1 CHROMAT_FILE:
MSMg01no072_p01.g1 PHD_FILE: MSMg01no072_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:51 2005
(312 letters)
>mm_chr6_4644338_4645047
Length = 710
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 1 tttccctgcaatgctcagggtactcttcaagaaaacatgttttgcttcattcttggtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttccctgcaatgctcagggtactcttcaagaaaacatgttttgcttcattcttggtgaa 451
Query: 61 caaataatagctttttttcttgtgttaacgtctgagctgaagagaagagatctgaaagaa 120
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caaataata-c-ttttttcttgtgttaacgtctgagctgaagagaagagatctgaaagaa 393
Query: 121 aaccaaacacagaggggtctgtgtgcttgggaccctgacagaaatgctcagtgaaatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaccaaacacagaggggtctgtgtgcttgggaccctgacagaaatgctcagtgaaatagt 333
Query: 181 gaaattggcagagagctcggctcctcagggtgtaatgtcataattgcattatgtgaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gaaattggcagagagctcggctcctcagggtgtaatgtcataattgcattatgtgaaaat 273
Query: 241 caaatgaagagccattacttacagctattattttagggttaggcttattttcttaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caaatgaagagccattacttacagctattattttagggttaggcttattttcttaacaaa 213
Query: 301 tttatctgaagg 312
||||||||||||
Sbjct: 212 tttatctgaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 710
Length adjustment: 9
Effective length of query: 303
Effective length of database: 701
Effective search space: 212403
Effective search space used: 212403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
