NGGATCATXXXXXXXXXXXXXXXXXXXXXXXCTATTTCAAGAGAATCCGC
GGAATTCTCCTGGCTTCCCTCCTAGTTCCTTTTGGTAACTTGTGCTGAGG
CTGTGGCCTGGATATCTTTGCTAGATTTTGTCACCACTATTGCTAACCTG
ACTCTACTAAACTGGACTGCTGGTGTATTTGTGAAGTGTTTGCTAGTGGA
TTGCACTGCAATTTCTAAACTATGAGCTGAACTGCTGATTTCCAGACAAC
AATGATGGGAATTACTTCAAAGAATCTTTCTAAACAGGTCCACTTTCCCC
ATATCCTTTCTTTTCTACTACCTCTGGTACGTGGTAGACTAAAGAGAGAT
GAAAGCATTAAGGCATTAAAAAATTAAAATTACAGGAGGCAGAAGGTAGG
AGAGGAAAGGGGTGCAGGATCAGGGGGAAGAGAGGAGAGAAGCCCAGAGA
GCTAAGAGAAGGATTAGAAATATGTAGCTGCTAGAATGGGTGCTGGGAAT
CACTAGAAAGTCCAGGTGAACTGGGATGGGGGAGGCTCCAAGGACTCAAT
GTGTATGACCTTTGCCAAAAAAGGGTAAAGAGTGGGGATATGGTACCTGA
AGAGACACCTCCAGTAGTAAAAACAGGGCCCCAGTGGAGGGGTGGGGACA
CCAACCCACCTTCAAATTTTTTGACCCAAATTGTTCCTGTTCATAAGAA

NTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTTTTCCCTCATTCGCCATATTCCC
CAGGGTAAACCAAATTCTCAGAGGAACAGAGGTTATGCTTCAAGTCCAAT
GAGAAGATTTGCAAGATTTCATTTCAGACCATGTGCTGAGCTGATGACTA
TCTTCAGCTGCCTCTAACAAATTAGACAATACTTGAGTGAACAGCTAATT
ATGCATTTGGCAGTTTTGAGTACAAGCCAAATGCAGATGTAAATATGATC
ACTGATCTCAAGCATCGGGAGAGTCATATGCCCAATAAAACCAACATTCT
TATGCTCCACATGACACAGTCAATGAAAGTGAATGGATCAAAACAGAAAG
TCACGATCTTACCTACCTCAACTGTTCATTCTCTTTATTCTTTACACAGG
GCAGATTTAAAAAGTAGTACATATTTTTTTTCAAGTACCTTCAATGTGTC
TTGGCACTTACAGAGAACACAATTATTGTCTGCATGCATTATTACTGTGT
GCATTGTATGCATACATCCAGGATTTGATGGGTAAAAAACACTCAATGTT
GTGTCTTTATAAACAATATAAAGTAGATATAATTTAAGTCTCATCAACTA
AATGTATTACAATATGTAAAATTTTTAAACTCAAGATTAAGGGAGGAGAT
TA

Query= MSMg01no073_e22.g1 MSMg01no073_e22.g1 CHROMAT_FILE:
MSMg01no073_e22.g1 PHD_FILE: MSMg01no073_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:20 2005
         (605 letters)



>mm_chr6_44397009_44398013
          Length = 1005

 Score = 1116 bits (577), Expect = 0.0
 Identities = 598/605 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttttccctcattcgccatattccccagggtaaaccaaattctcagaggaacagaggtt 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctttttccctcattctccatattccccagggtaaaccaaattctcagaggaacagaggtt 746

                                                                       
Query: 61  atgcttcaagtccaatgagaagatttgcaagatttcatttcagaccatgtgctgagctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgcttcaagtccaatgagaagatttgcaagatttcatttcagaccatgtgctgagctga 686

                                                                       
Query: 121 tgactatcttcagctgcctctaacaaattagacaatacttgagtgaacagctaattatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgactatcttcagctgcctctaacaaattagacaatacttgagtgaacagctaattatgc 626

                                                                       
Query: 181 atttggcagttttgagtacaagccaaatgcagatgtaaatatgatcactgatctcaagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttggcagttttgagtacaagccaaatgcagatgtaaatatgatcactgatctcaagca 566

                                                                       
Query: 241 tcgggagagtcatatgcccaataaaaccaacattcttatgctccacatgacacagtcaat 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 tcgggagagtcatatgcccaataaaaccaacattcttatgctccgcatgacacagtcaat 506

                                                                       
Query: 301 gaaagtgaatggatcaaaacagaaagtcacgatcttacctacctcaactgttcattctct 360
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 505 caaagtgaatggatcaaaacagaaagtcacaatcttacctacctcaactgttcattctct 446

                                                                       
Query: 361 ttattctttacacagggcagatttaaaaagtagtacatattttttttcaagtaccttcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttattctttacacagggcagatttaaaaagtagtacatattttttttcaagtaccttcaa 386

                                                                       
Query: 421 tgtgtcttggcacttacagagaacacaattattgtctgcatgcattattactgtgtgcat 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgtcttggcacttacagagaacacaattattgtctgcatgcattattactgtgtgcat 326

                                                                       
Query: 481 tgtatgcatacatccaggatttgatgggtaaaaaacactcaatgttgtgtctttataaac 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtatgcatacttccaggatttgatgggtaaaaaacactcaatgttgtgtctttataaac 266

                                                                       
Query: 541 aatataaagtagatataatttaagtctcatcaactaaatgtattacaatatgtaaaattt 600
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 aatataaagtagatataatttaagtctcatcaacgaaatgtattacaatatgtaaaattt 206

                
Query: 601 ttaaa 605
           |||||
Sbjct: 205 ttaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)