Query= MSMg01no073_h13.b1 MSMg01no073_h13.b1 CHROMAT_FILE:
MSMg01no073_h13.b1 PHD_FILE: MSMg01no073_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:32 2005
(211 letters)
>mm_chr6_4442681_4443290
Length = 610
Score = 385 bits (199), Expect = e-111
Identities = 208/211 (98%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 1 aatgttgctcttgtaagccacttaaactgtaggataatccccccggcagcaatagataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgttgctcttgtaagccacttaaactgtaggataatccccccggcagcaatagataat 260
Query: 61 gctacgcattttgttaagtagtagaaaataaggttaaatacattatctggttctaattgt 120
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gcaacgcattttgttaagtagtagaaaataaggttaaatacatta-ctggttctaattgt 319
Query: 121 tatagataccctccacactgtcaagcagagatgctcttcttgctgatgcaaaacatatag 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 tatagataccctccacactgtcaagcagagatgctcttcttgctgatgtaaaacatatag 379
Query: 181 agtcgatgaaagttttgtgggcgactataac 211
|||||||||||||||||||||||||||||||
Sbjct: 380 agtcgatgaaagttttgtgggcgactataac 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 610
Length adjustment: 9
Effective length of query: 202
Effective length of database: 601
Effective search space: 121402
Effective search space used: 121402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_h13.g1 MSMg01no073_h13.g1 CHROMAT_FILE:
MSMg01no073_h13.g1 PHD_FILE: MSMg01no073_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:32 2005
(240 letters)
>mm_chr6_4604663_4605302
Length = 640
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Minus
Query: 1 ttctttaaggagatgagggtttcccagggcttgtttcatcttctagaaagctctttcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttctttaaggagatgagggtttcccagggcttgtttcatcttctagaaagctctttcctg 381
Query: 61 atccttgtgaggaagcagctgcttttctgattatgtggacacttggctaggtgaccacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atccttgtgaggaagcagctgcttttctgattatgtggacacttggctaggtgaccacta 321
Query: 121 gtataacgttatgtcctgagtggacattcagcaccttgaactctgtcttcactaccgttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 gtataacgttatgtcctgagtggacattcagcaccttgaactctgtcttcactaccgtct 261
Query: 181 tctctgttcttacctgctgactactttgtcgtaggtgacacattccacatgcacagattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctctgttcttacctgctgactactttgtcgtaggtgacacattccacatgcacagattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
