Query= MSMg01no073_j14.b1 MSMg01no073_j14.b1 CHROMAT_FILE:
MSMg01no073_j14.b1 PHD_FILE: MSMg01no073_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:42 2005
(269 letters)
>mm_chr6_117654766_117655435
Length = 670
Score = 455 bits (235), Expect = e-132
Identities = 256/263 (97%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcactctcc-caatataaagaacctgcatgctgtttagtgtggaagaggggcc 63
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcacacttcacaatataaagaacctgcatgctgtttagtgtggaagaggggcc 264
Query: 64 ttttgtcttaccggtgtacacaggctctggtggattttcgtctaatagaatcatagtcag 123
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 ttttgtcttaagggtgtacacaggctctggtggattttcgtctaatagaatcagagtcag 324
Query: 124 aatttgcatattcagaccctgatgtgacatagttgctaggctctgcctgaactcatgagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatttgcatattcagaccctgatgtgacatagttgctaggctctgcctgaactcatgagg 384
Query: 184 cagtagggggtacctggggtgttcagattcaaggtccacaaggttaaggtgaaaactctg 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtagggggtacctggggtgtccagattcaaggtccacaaggttaaggtgaaaactctg 444
Query: 244 ggttttgttgacaccccctccca 266
|||||||||||||||||||||||
Sbjct: 445 ggttttgttgacaccccctccca 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 670
Length adjustment: 9
Effective length of query: 260
Effective length of database: 661
Effective search space: 171860
Effective search space used: 171860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_j14.g1 MSMg01no073_j14.g1 CHROMAT_FILE:
MSMg01no073_j14.g1 PHD_FILE: MSMg01no073_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:43 2005
(234 letters)
>mm_chr6_117771042_117771675
Length = 634
Score = 377 bits (195), Expect = e-109
Identities = 216/223 (96%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggctggcctcgaactca-taatccacctgcctcttcctcccgagtgc 59
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 515 actctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcccgagtgc 456
Query: 60 tgggattaaaggcgtccaccaccacgcccagcttatatgtatatattttaagtaaacata 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgggattaaaggcgtccgccaccacgcccagcttatatgtatatattttaagtaaacata 396
Query: 120 aaataacatttcttcaggctgggttttattttaattcctggccagcatccttaagttggg 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaataacattttttcaggctgggttttattttaattcctggccagcatccttaagttggg 336
Query: 180 atatttaagtgggctcatttaatatgcttcggtttttgttttg 222
|||||||||||||||||||||||||| || |||||||||||||
Sbjct: 335 atatttaagtgggctcatttaatatgttttggtttttgttttg 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
