Query= MSMg01no073_m04.b1 MSMg01no073_m04.b1 CHROMAT_FILE:
MSMg01no073_m04.b1 PHD_FILE: MSMg01no073_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:56 2005
(340 letters)
>mm_chr6_66789789_66790528
Length = 740
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%)
Strand = Plus / Plus
Query: 5 gaattctttcaggacctttatgaattttttaagaaatcatatgtcatgggttcatgcagg 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcaggaggtttatgaattttttaagaaatcatatgtcatgggttcatgcagg 264
Query: 65 tggttctcatagctcatgtactggggtcctcaatctgcaataaaagatcatgacctttaa 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 tggttctcatagctcatgtactgggggcctcaatctgcaataaaagatcatgacctttaa 324
Query: 125 tcaggaatcaaaagtaacaaaactattaatcaacaataacactatttgaagcatattttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaggaatcaaaagtaacaaaactattaatcaacaataacactatttgaagcatattttc 384
Query: 185 attctggcctcatcagtggggctctaaaataattcaatagaaactatatgatttacattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attctggcctcatcagtggggctctaaaataattcaatagaaactatatgatttacattt 444
Query: 245 attaggcttatggacaataattttgttagcggtactctgcatattggcagatgagatctc 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 attaggcttatggacaataattttgttagtggtactctgcatattggcagatgagatctc 504
Query: 305 tgtcccttctttccacagaacaggactcctccaaaa 340
||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtcccttctttccacagaacaggactcctccaaaa 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_m04.g1 MSMg01no073_m04.g1 CHROMAT_FILE:
MSMg01no073_m04.g1 PHD_FILE: MSMg01no073_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:56 2005
(394 letters)
>mm_chr6_66941588_66942382
Length = 795
Score = 719 bits (372), Expect = 0.0
Identities = 387/392 (98%), Gaps = 1/392 (0%)
Strand = Plus / Minus
Query: 1 taggaggatttcatgttattcatgcacggatgcagttgtgaggttttgtttcggacaatg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 592 taggaggatttcatgttattcatgcacagatgcagttgtgaggttttgtttcggacaatg 533
Query: 61 gaatatgctgtgatagtacctatgctggctaactattgtcctcagggtgtacacaactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaatatgctgtgatagtacctatgctggctaactattgtcctcagggtgtacacaactgc 473
Query: 121 ttggtatggctagtctcaaagggcagctgactctgggatcccttctcttccttccatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttggtatggctagtctcaaagggcagctgactctgggatcccttctcttccttccatgag 413
Query: 181 gctagagctacaggcaggcgaccatttgcacccagcatttacataggttctaagcccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gctagagctacaggcaggcgaccatttgcacccagcatttacataggttctaagcccaca 353
Query: 241 tctttttctttgtctggaaagtgctttaatcactggccatcttccagccacagataatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tctttttctttgtctggaaagtgctttaatcactggccatcttccagccacagataatga 293
Query: 301 -tttttttttaaaatttgctgttttttaaagatttatttttattgattttggctatatat 359
||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 292 tttttttttttaaatttgttgttttttaaagatttatttttattgattttggttatatat 233
Query: 360 aggtatgtgtatgtctgcatataggtacatgc 391
||||||||||||||||||||||||||||||||
Sbjct: 232 aggtatgtgtatgtctgcatataggtacatgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
