Query= MSMg01no075_m19.b1 MSMg01no075_m19.b1 CHROMAT_FILE:
MSMg01no075_m19.b1 PHD_FILE: MSMg01no075_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:33 2005
(625 letters)
>mm_chr6_91279847_91280870
Length = 1024
Score = 1108 bits (573), Expect = 0.0
Identities = 606/617 (98%), Gaps = 1/617 (0%)
Strand = Plus / Minus
Query: 9 aaaataaaataaaataaaataaaatgcctacagatacattactaaactcaacacaagaaa 68
|||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 852 aaaacaaaacaaaataaaataaaatgcttacagatacattactaaactcaacacaagaaa 793
Query: 69 tgagaaaaattactgacaacatgctgaatataaacactagcaatattctatatgtgaaca 128
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 792 tgagaaaaattactgacaacatgctgaatataaacactagcagtatactatatgtgaaca 733
Query: 129 aaaaccgtcccaaaagattatcttctaagatcatcataaagccaagaatatatgaaaaca 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aaaaccgtcccaaaagattatcttctaagatcatcataaagccaagaatatatgaaaaca 673
Query: 189 cagatgacctaggaactcacagatgatgtcggccccagagaactaagtatactgaaagat 248
|||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 672 cagacgacctaggaattcacagacgatgtcggccccagagaactaagtatactgaaagat 613
Query: 249 gtcagaaatgttaacaatggcccagtgtggaaacagttcatagtcatgggtagggacatt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gtcagaaatgttaacaatggcccagtgtggaaacagttcatagtcatgggtagggacatt 553
Query: 309 taatgttgcaaaataatttgttcaaccctaaatacaatttgaaacaaaatcccaactaat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 taatgttgcaaaataatttgttcaaccctaaatacaatttgaaacaaaatcccaactaat 493
Query: 369 ttacctggtgattttgacagattaattttattctatttgtttttttataagaaaattaga 428
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 492 ttacctggtgattttgacagattaattttattccatttgtttttttataagaaaattaga 433
Query: 429 gctaatgtaattaagaaaaaaaattttttaaagaacagcacataacactcaggtgtgctc 488
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 432 gctaatgtaattaagaaaaaat-ttttttaaagaacagcacataacactcaggtgtgctc 374
Query: 489 ttacacagcagcagcaagcaacaggagctctggggctccagcataggacactgaccacac 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttacacagcagcagcaagcaacaggagctctggggctccagcataggacactgaccacac 314
Query: 549 ttccctagaacactccagggttgggttccagccccaaactttcccctccccttccaaaac 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttccctagaacactccagggttgggttccagccccaaactttcccctccccttccaaaac 254
Query: 609 acaggaagtccagagac 625
|||||||||||||||||
Sbjct: 253 acaggaagtccagagac 237
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_m19.g1 MSMg01no075_m19.g1 CHROMAT_FILE:
MSMg01no075_m19.g1 PHD_FILE: MSMg01no075_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:33 2005
(623 letters)
>mm_chr6_91137791_91138813
Length = 1023
Score = 1139 bits (589), Expect = 0.0
Identities = 616/627 (98%), Gaps = 4/627 (0%)
Strand = Plus / Plus
Query: 1 tcctctttgatatccccaggaaccaggctgaggtttccaggtctctgcccacgtcttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcctctttgatatccccaggaaccaggctgaggtttccaggtctctgcccacgtcttggc 256
Query: 61 agcaccggagacatgacaggagaggtggggacccggaacttggcttagctgctaaacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agcaccggagacatgacaggagaggtggggacccggaacttggcttagctgctaaacccc 316
Query: 121 atgggattgcagtcctcttggctgcaggaatattggagccaagtcaaaactgggaagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgggattgcagtcctcttggctgcaggaatattggagccaagtcaaaactgggaagaac 376
Query: 181 acactcccacaggaatcctctcaggcagccccagtggggacagagccagcggcttccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 377 acactcccacaggaatcctctcaggcagccccagtggggacagagccagtggcttccttt 436
Query: 241 cctctgataagggtccctagctgaagaaactcaaactttggtctattgtgacagttcagc 300
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctctgaaaagggtctctagctgaagaaactcaaactttggtctattgtgacagttcagc 496
Query: 301 agaatcaacatgcccatggaaccctatggaagagccttctggtccaggagggcttcctga 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 497 agaatcaacatgcccatggaaccctatggaagagccttctagtccaggagggcttcctga 556
Query: 361 aggaagaggcacacgagctaagccttaaagagtaaataaagtgttcctgtgttagaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 557 aggaagaggcacacgagctaagccttaaagagtaaataaagtgttcctgtgttaggaaca 616
Query: 421 ttgattc----tggtagaaggaacagcacatgtaaaattccacaggcatgaagaagctat 476
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttgattgattgtggtagaaggaacagcacatgtaaaattccacaggcatgaagaagctat 676
Query: 477 gtagatacctatagctaagtactggagattctgaggacaagaggaaaggtggggttttcc 536
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gtagatatctatagctaagtactggagattctgaggacaagaggaaaggtggggttttcc 736
Query: 537 taaagtctttttccttactttagtcccttctaatggtggcctttctgtccctactgtctc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taaagtctttttccttactttagtcccttctaatggtggcctttctgtccctactgtctc 796
Query: 597 aaagctacttcctctcgggcagcaggt 623
|||||||||||||||||||||||||||
Sbjct: 797 aaagctacttcctctcgggcagcaggt 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
