AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTACTTAGATACGTACCCCATTTTTAGCTGGGATATTTGTTTTCATG
ATGTCTACTTTTTGAGTTTTTTTTAAAATTTAATTTTATTTGTAATTCAT
TTTATACACTCCATATTCCATTCTCCACCCCTCCCATCCCACCCTCCAAC
TGTTCCATATTCCATACCTCCTCCCCACCACACCCTGACTCCACATGATT
TCTCCTACCCTTCACCCCATCTGAGCTATGAGCTCTCTTTTGATTGTATA
GTAGGCCAAAACTCGTTTTCCATTCTGTAGGCTGCAATTTTGTGCAATGA
CAGTGTCCTTTATCTTAAAGAAGCTTTTCAGAGATTTTTTTTGATGTTAC
ATCTATTAATTGTTGATTTCAATGCCAACTCTAATGGTGTTCTTCTCAAA
AATTCTATTTCCAGGCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT
TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCACT
TAACTTCTCTTCTCTTCTCTTCCCATCTCCTTCCCTCACCCCCTTCACTT
CACCTCTCCTCTCCACACCTATTCATTCATCATCACTCCCCAATATATAC
ATCTAAATTAATCTCATATCCCTCCTTCTATTCCCACCACCTTTTCCCTT
ACTTTCCACTA

NNNNNNNNCCCCNNNNNNNNNNNNNNNNNNNCCCCCTTTCCCCTTNCCTC
CTCTTACCCNAACCTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTACCATT
CTTCTCACATTGGAAAGACAGGGAATAAGGCTTATGTGTGATAGTATGGG
GGTTTACATGGTCTCTGAGGATTCAATATCAGGTCATTCAACTTACAGAA
CAAGAACTTAACACACTAAGCCATTTTCCAAGGCAATGGTTAGTGGGTTT
TTTAAGAAAGTAACAGCAATAGATCTCAAAATGGATGACATAACTTCTAT
CTCAAATTTTCATCCATTACACAAGATTGGGTGTTTCTGAAATGTAGGCT
CAACAACAAACTGACAATGTAACTTAAAAGTAAAATATATTCTGATTTTA
GTGTATTGTACACCTTAGTGGTGAAAGATACCCGAGTCTTGCCAGTTTCT
AACAATTTGGAATTGGGGAAATTCTAAAATATAGGATTTTTGGACTACCA
TGACAACCTCTGACTTTTAAATTTTAATGTATATCATTAAAATTATTGCT
ATGTTGGCAATAACTATGTGCTATCCTGAGATCTAAAAATAAGAATGACC
AAGGGTAATTTCTTTGTTGCTCGATATTTGTGAACGTACATATGGGGGGA
GTACAGTGTCATTTTCTTTTTCACCTTTTTCCCATTCCCGCACCTCCTTT
CTGTTGTATTATTTATACTCTCTAATT

Query= MSMg01no076_l03.g1 MSMg01no076_l03.g1 CHROMAT_FILE:
MSMg01no076_l03.g1 PHD_FILE: MSMg01no076_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:46 2005
         (503 letters)



>mm_chr6_74182555_74183458
          Length = 904

 Score =  890 bits (460), Expect = 0.0
 Identities = 493/504 (97%), Gaps = 1/504 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttctaccattcttctcacattggaaagacagggaataaggcttatgtgtgatagtatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 704 tttctaccattcttctcacattggaaagacagggaataaggcttatgtgtgatagtacgg 645

                                                                       
Query: 61  gggtttacatggtctctgaggattcaatatcaggtcattcaacttacagaacaagaactt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gggtttacatgatctctgaggattcaatatcaggtcattcaacttacagaacaagaactt 585

                                                                       
Query: 121 aacacactaagccattttccaaggcaatggttagtgggttttttaagaaagtaacagcaa 180
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 584 aacacactaagccattttccaaggcaatggttagtgggtttttaaagtaagtaacagcaa 525

                                                                       
Query: 181 tagatctcaaaatggatgacataacttctatctcaaattttcatccattacacaagattg 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 524 tagatctcaaaatggatgacataacttctatctcaaattttcacccattacacaagattg 465

                                                                       
Query: 241 ggtgtttctgaaatgtaggctcaacaacaaactgacaatgtaacttaaaagtaaaatata 300
           ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 464 ggtgtttctgaaatgtaggctcaacaacaaactgacagtgtaacttagaagtaaaatata 405

                                                                       
Query: 301 ttctgattttagtgtattgtacaccttagtggtgaaagatacccgagtcttgccagtttc 360
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 404 ttctgattttagtgtattgtacaccttagtggtgaaggatacctgagtcttgccagtttc 345

                                                                       
Query: 361 taacaatttggaattggggaaattctaaaatataggatttttggactaccatgacaacct 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 344 taacaatttggaattggggaaattctaaaatataggatttttgaactaccatgacaacct 285

                                                                       
Query: 421 ctgacttttaaa-ttttaatgtatatcattaaaattattgctatgttggcaataactatg 479
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctgacttttaaacttttaatgtatatcattaaaattattgctatgttggcaataactatg 225

                                   
Query: 480 tgctatcctgagatctaaaaataa 503
           ||||||||||||||||||||||||
Sbjct: 224 tgctatcctgagatctaaaaataa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space:   440742
Effective search space used:   440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)