Query= MSMg01no076_n02.b1 MSMg01no076_n02.b1 CHROMAT_FILE:
MSMg01no076_n02.b1 PHD_FILE: MSMg01no076_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:56 2005
(497 letters)
>mm_chr6_63699832_63700728
Length = 897
Score = 789 bits (408), Expect = 0.0
Identities = 434/450 (96%), Gaps = 12/450 (2%)
Strand = Plus / Minus
Query: 48 ctcaggatgtctttcagttttaaaaaatgaagaacagctggacagtggtggtgtatacct 107
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 897 ctcaggatgtctttcagttttaaaaaatgaagaacagccggacagtggtggtgtatacct 838
Query: 108 ttaatcccagcacttgggagacagaggcaggtggatttctgagttcgaggccagcctggt 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttaatcccagcacttgggagacagaggcaggtggatttctgagttcgaggccagcctggt 778
Query: 168 ctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcgaaaaataa 227
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 777 ctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcgacaaataa 718
Query: 228 aacaaaaaacaaaaacaaaatcaaaaacaaaagagaagaagaacatttttgtttttacat 287
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aacaaaaaa------------caaaaacaaaagagaagaagaacatttttgtttttacat 670
Query: 288 tcttatcatattacctattgctacctaatagattgctcagattattgttttaagagctaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcttatcatattacctattgctacctaatagattgctcagattattgttttaagagctaa 610
Query: 348 cattgaagcttggtgttcaaatataaaaagccatattagtactggcccaaggggaagtga 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cattgaagcttggtgttcaaatataaaaagccatattagtactggcccaaggggaagtga 550
Query: 408 ttcctattgaaaacattatagtgttcacttatctcttcttttttgcttgattttccaaat 467
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 549 ttcctattgaaaacattgtagtgttcacttagctcttcttttttgcttgattttccaaat 490
Query: 468 tgagccgcaattgaaactttttcctttgtg 497
||||||||||||||||||||||||||||||
Sbjct: 489 tgagccgcaattgaaactttttcctttgtg 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_n02.g1 MSMg01no076_n02.g1 CHROMAT_FILE:
MSMg01no076_n02.g1 PHD_FILE: MSMg01no076_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:56 2005
(448 letters)
>mm_chr6_63565871_63566718
Length = 848
Score = 781 bits (404), Expect = 0.0
Identities = 435/448 (97%), Gaps = 5/448 (1%)
Strand = Plus / Plus
Query: 1 ttaattaacaggataatgtatattagagcttatcttcctgaatcagttaaaactgaaaaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ttaattaacaggataatgtatattagagcttatcttcatgaatcagttaaaactgaaaaa 260
Query: 61 tagtccacctagaatttataatagggaaggaaattattctcatactaccttcaaagtgta 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tagtccacctagaatttataatagggaaggaaattattttcatactaccttcaaagtgta 320
Query: 121 acaatagtaattaaagaaaaacatatcataaatttgaaagatgtaaggtaagaagacata 180
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 acaatagtacttaaagaaaaacatatcatgaatttgaaagatgtaaggtaagaagacata 380
Query: 181 ggaagagttggaagagaagacgcatgctatgttagagagaacaaggaaaagcaaatgata 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagagttggaagagaagacgcatggtatgttagagagaacaaggaaaagcaaatgata 440
Query: 241 taattgtacttaattaaaatttaaaaattaaaaattaacttagtctacttcatatatata 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 taattgtacttaattaaaatttaaaaattaaaaatta-----gtctacttcatatatata 495
Query: 301 aaatataaataccatcaaaattcagatgttggagtgtctacagaaacatattatgcagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 496 aaatataaataccatcaaaattcagatgttggagtgtctacagaaacatattatgttgtc 555
Query: 361 acagacaagcttaattaatgctactttaaataggattttcttcttagtgttgataagtaa 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 556 acagacaagcttaattaatgctactttaaataggattttctttttagtgttgataagtaa 615
Query: 421 aacatatgtgctgtgacccatttttttg 448
||||||||||||||||||||||||||||
Sbjct: 616 aacatatgtgctgtgacccatttttttg 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
