Query= MSMg01no076_n15.b1 MSMg01no076_n15.b1 CHROMAT_FILE:
MSMg01no076_n15.b1 PHD_FILE: MSMg01no076_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:59 2005
(404 letters)
>mm_chr6_35221897_35222700
Length = 804
Score = 772 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Minus
Query: 6 gaattctgaaggcctctctggtcaccacttgtctgtgagcttgccatgatgtagtgagag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaattctgaaggcctctctggtcaccacttgtctgtgagcttgccatgatgtagtgagag 545
Query: 66 ttcccggaagtccatgagctctcgatgacttcagcaaagggagcttgcggccccaccatg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttcccggaagtccatgagctctcgatgacttcagcaaagggagcttgcggccccaccatg 485
Query: 126 cagtggtctttaagtttgacgaactgtaaagtgctgacgaactgtgaaacgccctacctt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagtggtctttaagtttgacgaactgtaaagtgctgacgaactgtgaaacgccctacctt 425
Query: 186 gctttccacacactctccatttctttattgcctttgcagtctctaggatactctatgaag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gctttccacacactctccatttctttattgcctttgcagtctctaggatactctatgaag 365
Query: 246 agtccgagcatgtcagtcacagagaagagaaagatgaaaagtgcatatgtgacttaggat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agtccgagcatgtcagtcacagagaagagaaagatgaaaagtgcatatgtgacttaggat 305
Query: 306 gtatttgtacagaaattcaatgccatgggagaggcattaaattaagttaggagaggaggg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtatttgtacagaaattcaatgccatgggagaggcattaaattaagttaggagaggaggg 245
Query: 366 ctaaccctcaccactgtgccagggctgcagagcatgggg 404
|||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctaaccctcaccactgtgccagggctgcagagcatgggg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_n15.g1 MSMg01no076_n15.g1 CHROMAT_FILE:
MSMg01no076_n15.g1 PHD_FILE: MSMg01no076_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:59 2005
(217 letters)
>mm_chr6_35150946_35151561
Length = 616
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 1 caagttgatcctagaatgaaatgaactgctcaggttgacatttgtctggaatatagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagttgatcctagaatgaaatgaactgctcaggttgacatttgtctggaatatagaact 260
Query: 61 ggattttctaggatttttctaattatgtttgatgttgttatgctgtaaaaatactaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattttctaggatttttctaattatgtttgatgttgttatgctgtaaaaatactaaact 320
Query: 121 taactataatgtcttattgaaataaaataacgtaatccttgataaaatatttctgtaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactataatgtcttattgaaataaaataacgtaatccttgataaaatatttctgtaaag 380
Query: 181 tgattttttaaagaagttttttttttttttttaaaga 217
||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tgattttttaaagaagttttttttttttttt-aaaga 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 616
Length adjustment: 9
Effective length of query: 208
Effective length of database: 607
Effective search space: 126256
Effective search space used: 126256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
