Query= MSMg01no078_d05.b1 MSMg01no078_d05.b1 CHROMAT_FILE:
MSMg01no078_d05.b1 PHD_FILE: MSMg01no078_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:27 2005
(323 letters)
>mm_chr6_136100209_136100931
Length = 723
Score = 567 bits (293), Expect = e-166
Identities = 302/305 (99%), Gaps = 3/305 (0%)
Strand = Plus / Minus
Query: 22 gcctggaa-aaacggatgctgttctcagttctccatcagtagctcttagctggag-ccat 79
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 723 gcctggaacaaacggatgctgttctcagttctccatcagtagctcttagctggagtccat 664
Query: 80 ttgac-atatttggagaaatatttttggttgtcacaactgggagagggggagagaattgt 138
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttgacaatatttggagaaatatttttggttgtcacaactgggagagggggagagaattgt 604
Query: 139 catctagtgggtagaagctaaagatatattcccctctgcccagggcagtatcctgcagca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 catctagtgggtagaagctaaagatatattcccctctgcccagggcagtatcctgcagca 544
Query: 199 aagagctaagcagccccaaagggctacattccagctgagcaagccaaccatcccttctgc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagagctaagcagccccaaagggctacattccagctgagcaagccaaccatcccttctgc 484
Query: 259 tctccatgcgcattgttttctcaaagcatcatctagtcccacttcccattgcttggccct 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tctccatgcgcattgttttctcaaagcatcatctagtcccacttcccattgcttggccct 424
Query: 319 ccgtt 323
|||||
Sbjct: 423 ccgtt 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_d05.g1 MSMg01no078_d05.g1 CHROMAT_FILE:
MSMg01no078_d05.g1 PHD_FILE: MSMg01no078_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:27 2005
(335 letters)
>mm_chr6_135945212_135945946
Length = 735
Score = 648 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 1 tcttctgcctgccttactgagcactgtaaaatggaaagcaaagccagggtcggtcagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttctgcctgccttactgagcactgtaaaatggaaagcaaagccagggtcggtcagagg 260
Query: 61 caggcaggacagagtgagatgacacaggagttctgaattattcattttgatttatgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggcaggacagagtgagatgacacaggagttctgaattattcattttgatttatgtctc 320
Query: 121 atagtggcaattgttgccactttctgttgtttctcctgaatgttgaaattgtaaaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtggcaattgttgccactttctgttgtttctcctgaatgttgaaattgtaaaaagag 380
Query: 181 gactgaataattcggcatgactcaagaaggcagccagtgctggcaaaataggttcctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactgaataattcggcatgactcaagaaggcagccagtgctggcaaaataggttcctttt 440
Query: 241 gtgtttagtctgaacattcgtatgatatattggtttgtaatttaattaacaatctatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttagtctgaacattcgtatgatatattggtttgtaatttaattaacaatctatgat 500
Query: 301 ggccctaatgagtatggtgatatttgcaaagcatt 335
|||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccctaatgagtatggtgatatttgcaaagcatt 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
