NAAAATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAACTTTATCTCTCTCTCTCAAGGTGATGTTGATAAGCTACC
TTCTGTAAGAAACTTAATTTGACCCATTAAAGTATATTTTATTGATATAA
AATCTTCCTGAAGTCTTCAGTTCAGTTAATTTTATTTATTTAGACAAAAT
GTCAAGTCAAAAGTGATGGGATTCTATCTTCTTACTTTCCATTAACTTTA
TAGGTTATATAGTCATACAGTCATGGATATTTAATTAATACGCTACAGTT
AGTTTTGTCTATTTTAAGTACTAGTGTATAATTATGTTGTACCAATTTGC
TTTCCTTGGCATATTATTAAATACATTTCTTAAGTAGTGGTGTTGCCTAC
TTTTGAAAAATGAACCTACCTTCCCTAAAGGCCCTGTAAATATCTAATGT
ATTTGTTTATGAATGAGAAATAACATCTGACATTAAAACACTGTTCCTAA
AATTTATTTGATTTGAACATATGCCAACACTAATAGCATATGCTATAATA
ACTGGCCTTGTGTAATTATTGTTAGATTTCCTTCACAGAAAATCTATAAA
CACCTGATATTTATTAAATTATTTCTTAAAAAATTTTTTTACGGGCCTAG
ACAGATCATTCAGTGTTTAAGGGCCGCGGTTTGTTCTTCCAGAGATTCTG
AA

ATGCATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGTGCCCCATTTTTAA
TGGGGTTATTTCAACAACTGGTTTTGAGATATTTACAGCACTTGTACTTT
GGTCCATATAAGTTTAATGTCTTTTTGGACTTAACTTTGACAAAGAATTT
ATCTAAATAGTTCTAGTCCTTGAGATTCATCTAGGATTCTTTAAATTTGG
TTTCCAAAGTATTTCCTTTAAATTGTTTTTCATTTTCTAGAGAATTATGT
TAGAACTTTTTCACTGATTGGTCAGGATTTATGGAAAGTTTTATATCCTT
TATGTCATATGCTAAAGGTTTTCACTGTGTCTAGATTAATAGCCTATCTT
TCTCAAGCATATATCTTTCTAAAAATAGAGAAGGCATGCAAAGAAGCATA
GTTTAATTTTTATTGACAGGAACTAAGTCATAATATCATGAACCAAAATC
AATAAATATATGACATATCCGGATAACTTATTATTCCTAAGCATAGTGAA
ACCTTATACTTTATGTTCACTCTGTATCAGATGAGAGAAAGGTCTCCCAT
GCTCTTGGATCAGTATTATTTTTTCACTTTATTTTGTCCTCTAATCTCAA
GCTATCTACTCATTCCATGAAATACCCTTTGGAACTTCCTAATTG

Query= MSMg01no078_k06.b1 MSMg01no078_k06.b1 CHROMAT_FILE:
MSMg01no078_k06.b1 PHD_FILE: MSMg01no078_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:02 2005
         (418 letters)



>mm_chr6_44062894_44063711
          Length = 818

 Score =  723 bits (374), Expect = 0.0
 Identities = 374/374 (100%)
 Strand = Plus / Plus

                                                                       
Query: 45  agctaccttctgtaagaaacttaatttgacccattaaagtatattttattgatataaaat 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agctaccttctgtaagaaacttaatttgacccattaaagtatattttattgatataaaat 304

                                                                       
Query: 105 cttcctgaagtcttcagttcagttaattttatttatttagacaaaatgtcaagtcaaaag 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cttcctgaagtcttcagttcagttaattttatttatttagacaaaatgtcaagtcaaaag 364

                                                                       
Query: 165 tgatgggattctatcttcttactttccattaactttataggttatatagtcatacagtca 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgatgggattctatcttcttactttccattaactttataggttatatagtcatacagtca 424

                                                                       
Query: 225 tggatatttaattaatacgctacagttagttttgtctattttaagtactagtgtataatt 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tggatatttaattaatacgctacagttagttttgtctattttaagtactagtgtataatt 484

                                                                       
Query: 285 atgttgtaccaatttgctttccttggcatattattaaatacatttcttaagtagtggtgt 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atgttgtaccaatttgctttccttggcatattattaaatacatttcttaagtagtggtgt 544

                                                                       
Query: 345 tgcctacttttgaaaaatgaacctaccttccctaaaggccctgtaaatatctaatgtatt 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgcctacttttgaaaaatgaacctaccttccctaaaggccctgtaaatatctaatgtatt 604

                         
Query: 405 tgtttatgaatgag 418
           ||||||||||||||
Sbjct: 605 tgtttatgaatgag 618


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space:   330881
Effective search space used:   330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no078_k06.g1 MSMg01no078_k06.g1 CHROMAT_FILE:
MSMg01no078_k06.g1 PHD_FILE: MSMg01no078_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:02 2005
         (370 letters)



>mm_chr6_44206297_44207066
          Length = 770

 Score =  692 bits (358), Expect = 0.0
 Identities = 367/370 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgttcagctctgtgccccatttttaatggggttatttcaacaactggttttgagatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tttgttcagctctgtgccccatttttaatggggttatttcaacaactggttttgagatat 550

                                                                       
Query: 61  ttacagcacttgtactttggtccatataagtttaatgtctttttggacttaactttgaca 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 549 ttacagcacttgtactttggtccatacaagtttaatgtctttttggacttaactttgaca 490

                                                                       
Query: 121 aagaatttatctaaatagttctagtccttgagattcatctaggattctttaaatttggtt 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 489 aagaatttatctaaatagttctagtcattgagattcatctaggattctttaaatttggtt 430

                                                                       
Query: 181 tccaaagtatttcctttaaattgtttttcattttctagagaattatgttagaactttttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tccaaagtatttcctttaaattgtttttcattttctagagaattatgttagaactttttc 370

                                                                       
Query: 241 actgattggtcaggatttatggaaagttttatatcctttatgtcatatgctaaaggtttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 actgattggtcaggatttatggaaagttttatatcctttatgtcatatgctaaaggtttt 310

                                                                       
Query: 301 cactgtgtctagattaatagcctatctttctcaagcatatatctttctaaaaatagagaa 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 309 cactgtgtctagattaatagccaatctttctcaagcatatatctttctaaaaatagagaa 250

                     
Query: 361 ggcatgcaaa 370
           ||||||||||
Sbjct: 249 ggcatgcaaa 240


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)