ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTACTTACATATGTACCCCATTTTTAGCTGGGATATTTGTTTTCATGAT
GTCTACTTTTTGAGTTTTTTTTAAAATTTAATTTTATTTGTAATTCATTT
TATACACTCCATATTCCATTCTCCACCCCTCCCATCCCACCCTCCAACTG
TTCCATATTCCATACCTCCTCCCCACCACACCCTGACTCCACATGATTTC
TCCTACCCTTCACCCCATCTGAGCTATGAGCTCTCTTTTGATTGTATAGT
AGGCCAAAACTCGTTTTCCATTCTGTAGGCTGCAATTTTGTGCAATGACA
GTGTCCTTTATCTTAAAGAAGCTTTTCAGAGATTTTTTTTGATGTTACAT
CTATTAATTGTTGATTTCAATGCCAACTCTAATGGTGTTCTTCTCAAAAA
TTCTATTTCCAGGCCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC
TCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC
TCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTCTCTTCT
CCTTCTCCTCACCTCTCCTCTCATCCCCACTTCTCAATTTTCCTTTTTTC
AACTTATCATACCACCTTCTTTACTTTTCTCATCCTTCCCACACCACCT

TAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTCTACCATTCTTCTCACATTGGAAAGAC
AGGGAATAAGGCTTATGTGTGATAGTATGGGGGTTTACATGGTCTCTGAG
GATTCAATATCAGGTCATTCAACTTACAGAACAAGAACTTAACACACTAA
GCCATTTTCCAAGGCAATGGTTAGTGGGTTTTTTAAGAAAGTAACAGCAA
TAGATCTCAAAATGGATGACATAACTTCTATCTCAAATTTTCATCCATTA
CACAAGATTGGGTGTTTCTGAAATGTAGGCTCAACAACAAACTGACAATG
TAACTTAAAAGTAAAATATATTCTGATTTTAGTGTATTGTACACCTTAGT
GGTGAAAGATACCCGAGTCTTGCCAGTTTCTAACAATTTGGAATTGGGGA
AATTCTAAAATATAGGATTTTTGGACTACCATGACAACCTCTGACTTTTA
AATTTTAATGTATATCATTAAAATTATTGCTATGTTGGCAATAACTATGT
GCTATCCTGAGATCTAAAAATAAGAATGACCAAGGGTAATTTCTTTGTTG
TTTGATATTTGTGAGTGTAAATATGGGGGGAGTAGAGTGCCTCCTTCTCT
ATTTTACTTCTTCCCCCCGGTGCGACCTTTCCTCCTCCTCTCCTTCA

Query= MSMg01no079_a15.g1 MSMg01no079_a15.g1 CHROMAT_FILE:
MSMg01no079_a15.g1 PHD_FILE: MSMg01no079_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:33 2005
         (554 letters)



>mm_chr6_74182504_74183458
          Length = 955

 Score =  980 bits (507), Expect = 0.0
 Identities = 543/555 (97%), Gaps = 1/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttctaccattcttctcacattggaaagacagggaataaggcttatgtgtgatagtatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 755 tttctaccattcttctcacattggaaagacagggaataaggcttatgtgtgatagtacgg 696

                                                                       
Query: 61  gggtttacatggtctctgaggattcaatatcaggtcattcaacttacagaacaagaactt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gggtttacatgatctctgaggattcaatatcaggtcattcaacttacagaacaagaactt 636

                                                                       
Query: 121 aacacactaagccattttccaaggcaatggttagtgggttttttaagaaagtaacagcaa 180
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 635 aacacactaagccattttccaaggcaatggttagtgggtttttaaagtaagtaacagcaa 576

                                                                       
Query: 181 tagatctcaaaatggatgacataacttctatctcaaattttcatccattacacaagattg 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 575 tagatctcaaaatggatgacataacttctatctcaaattttcacccattacacaagattg 516

                                                                       
Query: 241 ggtgtttctgaaatgtaggctcaacaacaaactgacaatgtaacttaaaagtaaaatata 300
           ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 515 ggtgtttctgaaatgtaggctcaacaacaaactgacagtgtaacttagaagtaaaatata 456

                                                                       
Query: 301 ttctgattttagtgtattgtacaccttagtggtgaaagatacccgagtcttgccagtttc 360
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 455 ttctgattttagtgtattgtacaccttagtggtgaaggatacctgagtcttgccagtttc 396

                                                                       
Query: 361 taacaatttggaattggggaaattctaaaatataggatttttggactaccatgacaacct 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 395 taacaatttggaattggggaaattctaaaatataggatttttgaactaccatgacaacct 336

                                                                       
Query: 421 ctgacttttaaa-ttttaatgtatatcattaaaattattgctatgttggcaataactatg 479
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgacttttaaacttttaatgtatatcattaaaattattgctatgttggcaataactatg 276

                                                                       
Query: 480 tgctatcctgagatctaaaaataagaatgaccaagggtaatttctttgttgtttgatatt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgctatcctgagatctaaaaataagaatgaccaagggtaatttctttgttgtttgatatt 216

                          
Query: 540 tgtgagtgtaaatat 554
           |||| ||||||||||
Sbjct: 215 tgtgggtgtaaatat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 955
Length adjustment: 10
Effective length of query: 544
Effective length of database: 945
Effective search space:   514080
Effective search space used:   514080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)