Query= MSMg01no079_d23.b1 MSMg01no079_d23.b1 CHROMAT_FILE:
MSMg01no079_d23.b1 PHD_FILE: MSMg01no079_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:49 2005
(373 letters)
>mm_chr6_126695498_126696270
Length = 773
Score = 661 bits (342), Expect = 0.0
Identities = 363/370 (98%)
Strand = Plus / Minus
Query: 3 gaattctctctggcagctcctccagccctaagatcaacaccaccgtctggctattgacac 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaattctctctggcagcttctccagccctaagatcaacaccaccgtctggctattgacac 513
Query: 63 cctcctcctcctcctcattaaaaacctccaccttacagttcattataaatagtactcacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cctcctcctcctcctcattaaaaacctccaccttacagttcattataaatagtactcacc 453
Query: 123 cacaggataggtctttgcatttgtttttccttggtacattgctcagggggaaaacttagg 182
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 452 cacaggataggtctttgcatttggttttccttggtacattgctcagggggaaaacttagc 393
Query: 183 agaaaggaaatagtcacaccacttccagccccttactgattgaggaaggaacattagggc 242
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 392 agaaaggaaatagtcacatcacttccagccccttactgactgaggaaggaacattggggc 333
Query: 243 tcagattcacattgcccagttgttttcaaatagcttgtatgaccagtggatactactagc 302
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 332 tcagattcacattgcccagttgttttcaaatagcttgtaggaccagtggatactactagc 273
Query: 303 aggaaattcaccctttaggtttagaatatctggtttatctttagtgccatcccccctgct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aggaaattcaccctttaggtttagaatatctggtttatctttagtgccatcccccctgct 213
Query: 363 ctggagtgtg 372
||||||||||
Sbjct: 212 ctggagtgtg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_d23.g1 MSMg01no079_d23.g1 CHROMAT_FILE:
MSMg01no079_d23.g1 PHD_FILE: MSMg01no079_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:49 2005
(297 letters)
>mm_chr6_126516166_126516864
Length = 699
Score = 547 bits (283), Expect = e-160
Identities = 295/299 (98%), Gaps = 2/299 (0%)
Strand = Plus / Plus
Query: 1 agttac-aaattaggttccaagtgatttctgatggggtgcgagggggagggggaggcacc 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttacaaaattaggttccaagtgatttctgatggggtgcgagggggagggggaggcacc 260
Query: 60 taggcacaagg-aagaagaaatctcatcctacatgcctcggcataccaagacaccctcag 118
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggcacaaggaaaaaaaaaatctcatcctacatgcctcggcataccaagacaccctcag 320
Query: 119 gacttcctttcttccagataagagtggagggcaaaggtcgccagcctgacagttctgtcg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacttcctttcttccagataagagtggagggcaaaggtcgccagcctgacagttctgtcg 380
Query: 179 tcatccctaccagagaccaggggatgctgatctgcaaagcctccctctaagggaagctgt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatccctaccagagaccaggggatgctgatctgcaaagcctccctctaagggaagctgt 440
Query: 239 gctttagagaaacaggcgcggagacctgttacttgatgtccagggaattgtgtggtggg 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctttagagaaacaggcgcggagacctgttacttgatgtccagggaattgtgtggtggg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 699
Length adjustment: 9
Effective length of query: 288
Effective length of database: 690
Effective search space: 198720
Effective search space used: 198720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
