Query= MSMg01no080_h04.b1 MSMg01no080_h04.b1 CHROMAT_FILE:
MSMg01no080_h04.b1 PHD_FILE: MSMg01no080_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:21 2005
(201 letters)
>mm_chr6_75586906_75587507
Length = 602
Score = 337 bits (174), Expect = 4e-97
Identities = 195/202 (96%), Gaps = 1/202 (0%)
Strand = Plus / Minus
Query: 1 gaactacttttgttaaacttgtattaactaagtaactaagttaagtattatataacttaa 60
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 402 gaactacttttgttaaacttgtagtaactaagtaactaaattaagtattatataacttaa 343
Query: 61 tccccctctgttaggctacaggtatagcctaagccaaccctgtttaagtctcagaattag 120
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 342 cccccctctgttaggctacaggtatagcctaagccagccctgtttaggtctcagaattag 283
Query: 121 cagggaagtattgaggaaaaaaaatttttt-gtgaagttcttttcaacacctttgcttca 179
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 282 cagggaagtattgaagaaaaaaaatttttttgtgaagttcttttcaacacctttgcttca 223
Query: 180 aaatctcttgcatccatcaaag 201
||||||||||||||||||||||
Sbjct: 222 aaatctcttgcatccatcaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 602
Length adjustment: 8
Effective length of query: 193
Effective length of database: 594
Effective search space: 114642
Effective search space used: 114642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_h04.g1 MSMg01no080_h04.g1 CHROMAT_FILE:
MSMg01no080_h04.g1 PHD_FILE: MSMg01no080_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:21 2005
(111 letters)
>mm_chr6_75453943_75454454
Length = 512
Score = 201 bits (104), Expect = 9e-57
Identities = 110/112 (98%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 1 aatgtgctctttaagaaaataaaatgcataatgaaagcttcattccaggtgaaaaataac 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 aatgtgctctttaagaaaataaaatgcaaaatgaaagcttcattccaggtgaaaaataac 260
Query: 61 cacttggttttttt-ggtttttattctgtctctcaatgtgtttttcttaatt 111
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttggttttttttggtttttattctgtctctcaatgtgtttttcttaatt 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 111
Length of database: 512
Length adjustment: 8
Effective length of query: 103
Effective length of database: 504
Effective search space: 51912
Effective search space used: 51912
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
