Query= MSMg01no080_l09.b1 MSMg01no080_l09.b1 CHROMAT_FILE:
MSMg01no080_l09.b1 PHD_FILE: MSMg01no080_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:42 2005
(365 letters)
>mm_chr6_77644326_77645093
Length = 768
Score = 636 bits (329), Expect = 0.0
Identities = 355/365 (97%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 4 ggaattcataatgaccaggagtaaactgaagggccttgcacaaacctaaccagtgtccat 63
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 ggaattcataatgacaaggagtaaactgaagggccttgcactaacctaaccagtgtccat 263
Query: 64 tgtcatcaggactaagtggctggaaatcatgtggtaacttcatc---ttttttttttccc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 264 tgtcatcaggactaagtggctggaaatcatgtggtaacttcatcttttttttttttttcc 323
Query: 121 agtcagcaagccctttaattgtattttttacttgaagtcatcttaaaactccaaagcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtcagcaagccctttaattgtattttttacttgaagtcatcttaaaactccaaagcaag 383
Query: 181 ttgaaaatggagcccgagggatgcaatcactattttcttacccatgccttcaaaagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaaaatggagcccgagggatgcaatcactattttcttacccatgccttcaaaagagaa 443
Query: 241 taaaatggagagacccatttactatcccattaccagggattcgtcagattagtatgttaa 300
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 444 taaaatgcagagacccatttactatcccagcaccagggattcgtcagattagtatgctaa 503
Query: 301 gcccatagaaaggggcaagtggttctctatatgctacaattcctccaaagcgtggaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcccatagaaaggggcaagtggttctctatatgctacaattcctccaaagcgtggaggag 563
Query: 361 gtaca 365
|||||
Sbjct: 564 gtaca 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 768
Length adjustment: 9
Effective length of query: 356
Effective length of database: 759
Effective search space: 270204
Effective search space used: 270204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_l09.g1 MSMg01no080_l09.g1 CHROMAT_FILE:
MSMg01no080_l09.g1 PHD_FILE: MSMg01no080_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:42 2005
(463 letters)
>mm_chr6_77807111_77807972
Length = 862
Score = 706 bits (365), Expect = 0.0
Identities = 377/381 (98%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 83 ggtgggctaatgcccagggattactctgttaatttaataacgtcagaaaagacatatcag 142
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 862 ggtgggctaatgcccagggattactatgttaatttaataacatcagaaaagacatatcag 803
Query: 143 ctgctaaaagcaatcctgagatgaagtgtctttggtccttgccatgggactcaaccatca 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctgctaaaagcaatcctgagatgaagtgtctttggtccttgccatgggactcaaccatca 743
Query: 203 cagatcatgcaaaaacagtgggccacctttaagggaagtcatctgctaagcctttaacct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cagatcatgcaaaaacagtgggccacctttaagggaagtcatctgctaagcctttaacct 683
Query: 263 tacctagatggcttctgacagatcacattaaccttaatcagtcagctttgtttagggatc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tacctagatggcttctgacagatcacattaaccttaatcagtcagctttgtttagggatc 623
Query: 323 tctatgacatgtggtatgctggaagtttaacagatcctatggaagtagatgctatgatct 382
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tctatgacatgtggtatgttggaagtttaacagatcctatggaagtagatgctatgatct 563
Query: 383 gtatttctaggcaaaagagaagaaagccataacataggaagagatttttggttctgcttc 442
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 gtatttctaggcaaaagagaagaaagccataacataggaagaga-ttttggttctgcttc 504
Query: 443 cattattaatacaaatgataa 463
|||||||||||||||||||||
Sbjct: 503 cattattaatacaaatgataa 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 862
Length adjustment: 10
Effective length of query: 453
Effective length of database: 852
Effective search space: 385956
Effective search space used: 385956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
