Query= MSMg01no080_l18.b1 MSMg01no080_l18.b1 CHROMAT_FILE:
MSMg01no080_l18.b1 PHD_FILE: MSMg01no080_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:44 2005
(321 letters)
>mm_chr6_25906595_25907316
Length = 722
Score = 569 bits (294), Expect = e-166
Identities = 309/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 6 gaattcattgagtaa-catataaatgtagaagttcgacatatttaataaaaacaaataat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcattgagtaaacatataaatgtagaagttcgacatatttaataaaaacaaataat 265
Query: 65 caattcattaaccaatccagaaaaggactaattgttctcagatacaaatctagttgtaac 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 266 caattcattaaccaatccagaaaaggactaattgttctcagatacaaatgtagttgtaac 325
Query: 125 tactcttgaacatttattgtacaaaactgaaattcattacttcattctgtagccatcatt 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tactcttgaacatctattgtacaaaactgaaattcattacttcattctgtagccatcatt 385
Query: 185 ctctcaatttgtgagagtcaaccattaaaatggagaatgaaatgacaagtacagcactag 244
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 386 ctcttaatttgtgagagtcaaccattaaaatggagaatgaaatgacaagtatagcactag 445
Query: 245 ttgaaagaatttcaaaaagaaacaaaaatgataacgagtacatacattgccattggtgag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgaaagaatttcaaaaagaaacaaaaatgataacgagtacatacattgccattggtgag 505
Query: 305 ggggtgagggttgg 318
||||||||||||||
Sbjct: 506 ggggtgagggttgg 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_l18.g1 MSMg01no080_l18.g1 CHROMAT_FILE:
MSMg01no080_l18.g1 PHD_FILE: MSMg01no080_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:44 2005
(243 letters)
>mm_chr6_26074942_26075584
Length = 643
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 tctttcaaactttcacttggagaagagatgtcacagtataaggacaggggatgaatctca 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 442 tctttcaaactttcacttggagaggagatgtcagagtataaggacaggggatgaatctca 383
Query: 61 ctttctgtgggatggtgctaaatgactttctccatgttccctaacttgttgacatcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctttctgtgggatggtgctaaatgactttctccatgttccctaacttgttgacatcacac 323
Query: 121 atattaccttttcgattaaaccccatcacattttggaatttgcttcaagatcatgtatga 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atattactttttcgattaaaccccatcacattttggaatttgcttcaagatcatgtatga 263
Query: 181 agtttacagccctgaacgagacccatgtgaaagaggaattattaccaacataataattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agtttacagccctgaacgagacccatgtgaaagaggaattattaccaacataataattac 203
Query: 241 ta 242
||
Sbjct: 202 ta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
