Query= MSMg01no081_i22.b1 MSMg01no081_i22.b1 CHROMAT_FILE:
MSMg01no081_i22.b1 PHD_FILE: MSMg01no081_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:48 2005
(597 letters)
>mm_chr6_4117162_4118152
Length = 991
Score = 1002 bits (518), Expect = 0.0
Identities = 564/592 (95%), Gaps = 23/592 (3%)
Strand = Plus / Minus
Query: 23 attttctagtaactttggtaaaatcagagactagactactcaatggctccatttgaaagg 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 982 attttctagtaactttggtaaaatcagagactagactactcaatggctccatttggaagg 923
Query: 83 gagaatttgacctttaaataacagcatctactacagtccagcctttgtgctactcaccta 142
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 922 gagaatttgacctttaaataacagcatctactacagtccaacctttgtgctactcaccta 863
Query: 143 tttatataaaaactgcccct---cccccca--------------acacacacacacacac 185
|||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 862 tttatataaaaactgcccctcccccccccaacacacacacacacacacacacacacacac 803
Query: 186 acacacacacaatggctcctctaggactctggttaatcccctttgctacaggaatttaca 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 802 acacacacacaatggctcctctaggactctggttaatcccctttgctacaggaa-ttaca 744
Query: 246 agaggattactgacataaagtactagcctcattactgatgttaacttaaggaaaacaatt 305
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 743 agaggattactgacataaagtactagcctcattactgatg-----ttaaggaaaacaatt 689
Query: 306 gatatttcctttgtatctccataaattcacttccccacccctgtcatgcttgttctatat 365
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 688 gatatttcctttgtatctccataaattcacttccccacccctgccatgcttgttctatat 629
Query: 366 ggctgagttatggaagctacaatctttcaccataatagatctgagtttctggtcatgata 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggctgagttatggaagctacaatctttcaccataatagatctgagtttctggtcatgata 569
Query: 426 tctttccagattatccttttgtactcatgcactaactatcaaaattgcaaggaattacaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tctttccagattatccttttgtactcatgcactaactatcaaaattgcaaggaattacaa 509
Query: 486 ggaatgggccggggatcacttccctgtaggccttcatgttcctgtttgctaggcttttgc 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggaatgggccggggatcacttccctgtaggccttcatgttcctgtttgctaggcttttgt 449
Query: 546 tatactttggtttgtgacaggactcctttgcatttctggcagacatattaat 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 448 tatactttggtttgtgacaggactcctttgcatttctggtagacatattaat 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 991
Length adjustment: 10
Effective length of query: 587
Effective length of database: 981
Effective search space: 575847
Effective search space used: 575847
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_i22.g1 MSMg01no081_i22.g1 CHROMAT_FILE:
MSMg01no081_i22.g1 PHD_FILE: MSMg01no081_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:48 2005
(614 letters)
>mm_chr6_4006107_4007120
Length = 1014
Score = 1172 bits (606), Expect = 0.0
Identities = 612/614 (99%)
Strand = Plus / Plus
Query: 1 taatcaaccagttatacaaaaattgtgttgaccaagggtgctatattaaacagaagtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatcaaccagttatacaaaaattgtgttgaccaagggtgctatattaaacagaagtaag 260
Query: 61 attttgtataatgtagcatttatgagagaaaagcagccagagttgagaaagaacactcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 attttgtataatgtagcatttatgagagaaaagcagccagagttgagaaagaacacccac 320
Query: 121 aaagacctctgaatgataggaagaaagaagtaaatactattcagagagcaggctgctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagacctctgaatgataggaagaaagaagtaaatactattcagagagcaggctgctcct 380
Query: 181 taaaaatgcattcaccaggcaccctgaggcatcccataattacctcctcctggacaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaatgcattcaccaggcaccctgaggcatcccataattacctcctcctggacaaggt 440
Query: 241 gtggatgtacagagaagctaatgaatgcagaaacaaattgaacctctttgcttggcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggatgtacagagaagctaatgaatgcagaaacaaattgaacctctttgcttggcaaac 500
Query: 301 tttgttccacctctgttagctctggaggaaaataaacacagcttttaaaccttttacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgttccacctctgttagctctggaggaaaataaacacagcttttaaaccttttacatg 560
Query: 361 attagacttcaaaacaattttagaatgtattattttcttaactgaaccctgagtttttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attagacttcaaaacaattttagaatgtattattttcttaactgaaccctgagtttttgt 620
Query: 421 agcacacatttgtaatatagtcataatcctcactattatattattctaaatattaaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcacacatttgtaatatagtcataatcctcactattatattattctaaatattaaaaat 680
Query: 481 atgtgtgacctcatgagacagttcacatgtcctacttacttgaaagcctaacagctagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtgtgacctcatgagacagttcacatgtcctacttacttgaaagcctaacagctagag 740
Query: 541 tatatactttaaatactatttgtacatgaaatgaatgaatgatattaagaacatattgta 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 741 tatatactttaaatactatttgtacatgaaatgaatgaatgatataaagaacatattgta 800
Query: 601 tctgattacaaaca 614
||||||||||||||
Sbjct: 801 tctgattacaaaca 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
