CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTCATTTATCTCTATCTAACATTTTATTATTATCACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACAACT
ACTACTACTACTGCTGCTACTGTTGCTGCTGCTGCTGCTGCTGCTCCTCC
TCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTACTACTACTATCACCACAG
GACAGAAATCCCAATAATCTATGTGCAAAGTTCCCTATAATCACCAGTAA
TTACCGTGAGACTTGACTATCTTTACTAACCTAGTGCACTGAGAGATACT
AATGGCATGAAAGGTCAAATCCTTTCGTGAGACTCAAATAAATATTTACT
CACCTTGTAAGTGTACTCACCTCTTACTACAAAACAAAATGTTTTCTTTT
CCCTCCACTTTTAAGGTCATTGACCCACCCTCCCTCCTTTTATATAATCT
CTATTTTCCTTTCCCACAATATTTTTTTACCTGCTGTCCTCCCTCCGATA
ATATTCCCCCCCCCCCCCCTTTTTTTCTCCTGATTCTTCCTCTTTCTTTT
TTTTCTCTTCATTCACCTTTCACCCCCCCGTCTTTTAATCCCTCCTGTTC
ACCTTCTTCCCCTTCTTTCCCTTTTTTTCTTCTATCCCCCCCCCCTCCCA
CTTTAATCACTTTCTCCCTCTCTCTATTTTTTCCTCN

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCATTTGTATTTCTCTGGATTTTCTGACCTT
CAGTGCACTCACTTTGATTATGCTGTGCTTTGCTACAATATTAGAAATTA
ATTTGAAGCACATTGCTGTTTTACTTAAAATAATTGGGCAGTACACATTA
AGTAAAAATTTTAAATTTATACTTGCAAATACATTAAAGCTAATAGCATG
AAACTACTGGTTGTTATTGCCAAAAGGAGAATTAAGCGTATTGTTTAATA
AACTCTTTGGAAATTGCAACTGTTACCTTAATGCAACTCATTCCAATTTT
CATTACCTGAATCTTTAGTATTACCAACACATATTTTAAATATCAATAAT
TGAGATCCTTTACCTGGGAGCTACGTAAGAAAACCTCACATACGTTTATT
CCTTATAAGTTTAGACATGCACGTAAAATATTTGTGTAACAAAATCATGT
TATTTTTCATATTAGTGCTTTTATGAATTTTCAATGCGTAGAGACAGTGA
TGTGTAAGGGAATCTGTTAGTGAGCATGGGATCTATATGCATAACAATAA
AAATAACCTTTCATGTTAAAATACTGCATATGTGTTGGCCACAGAAAACT
GGTTTTACAACTTTAATGGTCTCTATCAAATCCTATTTTTTTGAAAAAAN

Query= MSMg01no082_k02.g1 MSMg01no082_k02.g1 CHROMAT_FILE:
MSMg01no082_k02.g1 PHD_FILE: MSMg01no082_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:08 2005
         (599 letters)



>mm_chr6_45276175_45277173
          Length = 999

 Score = 1127 bits (583), Expect = 0.0
 Identities = 595/599 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatttgtatttctctggattttctgaccttcagtgcactcactttgattatgctgtgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatttgtatttctctggattttctgaccttcagtgcactcactttgattatgctgtgct 260

                                                                       
Query: 61  ttgctacaatattagaaattaatttgaagcacattgctgttttacttaaaataattgggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgctacaatattagaaattaatttgaagcacattgctgttttacttaaaataattgggc 320

                                                                       
Query: 121 agtacacattaagtaaaaattttaaatttatacttgcaaatacattaaagctaatagcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtacacattaagtaaaaattttaaatttatacttgcaaatacattaaagctaatagcat 380

                                                                       
Query: 181 gaaactactggttgttattgccaaaaggagaattaagcgtattgtttaataaactctttg 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaactactggttgttattgccaaaaggagaattaagcgtattgtttaataaactctttg 440

                                                                       
Query: 241 gaaattgcaactgttaccttaatgcaactcattccaattttcattacctgaatctttagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaattgcaactgttaccttaatgcaactcattccaattttcattacctgaatctttagt 500

                                                                       
Query: 301 attaccaacacatattttaaatatcaataattgagatcctttacctgggagctacgtaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attaccaacacatattttaaatatcaataattgagatcctttacctgggagctacgtaag 560

                                                                       
Query: 361 aaaacctcacatacgtttattccttataagtttagacatgcacgtaaaatatttgtgtaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaacctcacatacgtttattccttataagtttagacatgcacgtaaaatatttgtgtaa 620

                                                                       
Query: 421 caaaatcatgttatttttcatattagtgcttttatgaattttcaatgcgtagagacagtg 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 caaaatcatgttatttttcatattagtgcttttatgaattttcaatgcgtagagacagag 680

                                                                       
Query: 481 atgtgtaagggaatctgttagtgagcatgggatctatatgcataacaataaaaataacct 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 atgtgtaagggaatctgttagtgagcatgggatctatatgcatatcaataaaaataacct 740

                                                                      
Query: 541 ttcatgttaaaatactgcatatgtgttggccacagaaaactggttttacaactttaatg 599
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcatgtgaaaatactgcatatgtgttggccacagaaaactggttttacaactttaatg 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)