Query= MSMg01no082_m03.b1 MSMg01no082_m03.b1 CHROMAT_FILE:
MSMg01no082_m03.b1 PHD_FILE: MSMg01no082_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:18 2005
(306 letters)
>mm_chr6_33140012_33140718
Length = 707
Score = 540 bits (279), Expect = e-158
Identities = 300/307 (97%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 1 gctacctgcggataccggggtctcccccatacaagtttctttag-ataaataaaacaata 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 507 gctacctgcggataccggggtctcccccatacaagtttctttagcataaataaaacaata 448
Query: 60 accctggagagagttactgtcctcaacacacaattgatcaccaaagagatttagcccaaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 447 accctggagagagttactgtcctcaacacacaattgatcaccaaagagatttagcctaaa 388
Query: 120 atatttgaattgaaaggctgtgtggtgttcaagccttctttgtccttctgggggtgcttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atatttgaattgaaaggctgtgtggtgttcaagccttctttgtccttctgggggtgcttt 328
Query: 180 taggattttcaagaaaaatctccttttttttcttatggaaattttttttcttctgcatga 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 327 taggattttcaagaaaaatctccttttttttcttatggaatttttttttcttctggatga 268
Query: 240 tcttttctaatccctcacctggcatctgtgtgttgtcacaggacttgagttacctatgat 299
|||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 tcttttctaatcccccatctggcatctgtgtgttgtcacaggacttgagttagctatgat 208
Query: 300 tggatag 306
|||||||
Sbjct: 207 tggatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 707
Length adjustment: 9
Effective length of query: 297
Effective length of database: 698
Effective search space: 207306
Effective search space used: 207306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_m03.g1 MSMg01no082_m03.g1 CHROMAT_FILE:
MSMg01no082_m03.g1 PHD_FILE: MSMg01no082_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:19 2005
(310 letters)
>mm_chr6_32986318_32987027
Length = 710
Score = 474 bits (245), Expect = e-138
Identities = 296/319 (92%), Gaps = 13/319 (4%)
Strand = Plus / Plus
Query: 1 ccaa-aaagacataagactccataaatttaggtgacaattacaatcaaaagacattccaa 59
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccaacaaagacataagacaccataaatttaggtgacaattacaatcaaaagacattccaa 247
Query: 60 taaaacaaccttcgaagtgtggtcatgttcttctccgcctctctgtctccctctgtctct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 taaaacaaccttcgaagtgtggtcatgttcttctccgcctctctgtctccctctgtctct 307
Query: 120 ctgtctg------tctctctgtctgtctgtctgtctgtctgtctgtctc--tctccc--- 168
||||||| ||||||||||||||| ||| ||| ||| ||| |||| ||||||
Sbjct: 308 ctgtctgtctgtctctctctgtctgtctctctctctctctctctctctctgtctccctcc 367
Query: 169 -tctctctgtctctctctctctctctgtatgtgtgtttatgtatgtgtctatgtgtctgt 227
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 368 atctctctgtctctctctctctctgtgtatgtgtgtttatgtatgtgtctatgtgtctgt 427
Query: 228 gttgcatgcgtacacttgcccgccctcctccctccctccgtccctgaatctaaagatgtg 287
|||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gttgcacgcgtacgcttgccctccctcctccctccctccgtccctgaatctaaagatgtg 487
Query: 288 aggatggcagcatttccca 306
|||||||||||||||||||
Sbjct: 488 aggatggcagcatttccca 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
