Query= MSMg01no082_p05.b1 MSMg01no082_p05.b1 CHROMAT_FILE:
MSMg01no082_p05.b1 PHD_FILE: MSMg01no082_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:33 2005
(460 letters)
>mm_chr13_50073434_50074293
Length = 860
Score = 630 bits (326), Expect = 0.0
Identities = 422/456 (92%), Gaps = 7/456 (1%)
Strand = Plus / Plus
Query: 5 gaattcagaacagtcactgacacattctcaacttcaggagtcagggaccaaacatcatcc 64
||||||||||||| || ||||||||| | |||||||||||| |||||| |||||||||||
Sbjct: 205 gaattcagaacagccaatgacacattgttaacttcaggagttagggacaaaacatcatcc 264
Query: 65 ctgtataaccagaagaaaccaagttcccaaagttgacagggtgtatcctgaaaccaaagg 124
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 265 ttgtataaccagaagaaaccaagttcccaaaggagacaggatgtatcctgaaaccaaagg 324
Query: 125 tccccaagctagaccctccaacacaaggaccctggcacgaggaacctccttttgatttga 184
|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 tccccaagctagaccctcaaacacaaggaccctggcatgaggaacctccttttgatttgc 384
Query: 185 tagtcatgggggctcaagagactccctaaaattatatattactgatgctttccttaatca 244
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtcatgggggcccaagagactccctaaaattatatattactgatgctttccttaatca 444
Query: 245 cttcctaggaattgaaggtaagactctattgctgaaaataccaagcatttgggacatagg 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 cttcctaggaattgaaggtaagaccctattgctgaaaataccaagcatttgggacatagg 504
Query: 305 actcagggaatttggtatagatgtgatactgaaacctcctccatgaggactagctttcag 364
|||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||
Sbjct: 505 gctcaaggaatttggtatagatgtgatactaaaacctcctccatgaggaccaactttcag 564
Query: 365 aatcctggaagtttctatagaagctgccaagagagggacacaatcaatcatgatgcctat 424
|||||||| || |||||||||||||| ||||||||||||||||||| | ||| | || |
Sbjct: 565 aatcctggcaggttctatagaagctgtcaagagagggacacaatca-taatg-t--ctgt 620
Query: 425 taaccaccaagtgaccaacatgatagggtgtcccaa 460
||||||||| ||||||||||||||||| ||||||
Sbjct: 621 taaccaccatgtgaccaacatgatagg---tcccaa 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_p05.g1 MSMg01no082_p05.g1 CHROMAT_FILE:
MSMg01no082_p05.g1 PHD_FILE: MSMg01no082_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:33 2005
(330 letters)
>mm_chr6_46971942_46972672
Length = 731
Score = 609 bits (315), Expect = e-179
Identities = 327/331 (98%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 1 atatttttctttgcatagtgatctagacagaaaagagtgaagatttcacctggtatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatttttctttgcatagtgatctagacagaaaagagtgaagatttcacctggtatagta 260
Query: 61 tccctctaaatggaaaagagattgatgattaacacagaaaaaaaaaaaa-cccacctatg 119
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tccctctaaatggaaaagaggttgatgattaacacagaaaaaaaaaaaaacccacctatg 320
Query: 120 aaaaaactggatccagctacaaaggctaatctatttcaccagtacttttgctttataaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 aaaaaactggatccagctacaaaggctaatctatttcaccagtacttttgctttagaaaa 380
Query: 180 aataagaattttgtacatgaatataatgtattttgatcaaatctacatccatttccttct 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aataagaattttgtacatgaatataatgtattttgatcaaatctacctccatttccttct 440
Query: 240 ctctagtttctttcatatccttcatccactcttccttcccaaatccatatgttctctttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctagtttctttcatatccttcatccactcttccttcccaaatccatatgttctctttt 500
Query: 300 atatccagtgactccacttattactgccagt 330
|||||||||||||||||||||||||||||||
Sbjct: 501 atatccagtgactccacttattactgccagt 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 731
Length adjustment: 9
Effective length of query: 321
Effective length of database: 722
Effective search space: 231762
Effective search space used: 231762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
