Query= MSMg01no083_a05.b1 MSMg01no083_a05.b1 CHROMAT_FILE:
MSMg01no083_a05.b1 PHD_FILE: MSMg01no083_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:37 2005
(440 letters)
>mm_chr6_77644326_77645168
Length = 843
Score = 781 bits (404), Expect = 0.0
Identities = 430/440 (97%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 4 ggaattcataatgacccggagtaaactgaagggccttgcacaaacctaaccagtgtccat 63
||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 ggaattcataatgacaaggagtaaactgaagggccttgcactaacctaaccagtgtccat 263
Query: 64 tgtcatcaggactaagtggctggaaatcatgtggtaacttcatc---ttttttttttccc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 264 tgtcatcaggactaagtggctggaaatcatgtggtaacttcatcttttttttttttttcc 323
Query: 121 agtcagcaagccctttaattgtattttttacttgaagtcatcttaaaactccaaagcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtcagcaagccctttaattgtattttttacttgaagtcatcttaaaactccaaagcaag 383
Query: 181 ttgaaaatggagcccgagggatgcaatcactattttcttacccatgccttcaaaagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaaaatggagcccgagggatgcaatcactattttcttacccatgccttcaaaagagaa 443
Query: 241 taaaatggagagacccatttactatcccagcaccagggattcgtcagattagtatgttaa 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 444 taaaatgcagagacccatttactatcccagcaccagggattcgtcagattagtatgctaa 503
Query: 301 gcccatagaaaggggcaagtggttctctatatgctacaattcctccaaagcgtggaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcccatagaaaggggcaagtggttctctatatgctacaattcctccaaagcgtggaggag 563
Query: 361 gtacacaagcaccattagacagcacacatactgctgaaaaacactacatgggcatggtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 gtacacaagcaccattagacagcacacatactgctgaaaaacactacatgggcatgggca 623
Query: 421 gagagctctgcccttctaca 440
||||||||||||||||||||
Sbjct: 624 gagagctctgcccttctaca 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 843
Length adjustment: 9
Effective length of query: 431
Effective length of database: 834
Effective search space: 359454
Effective search space used: 359454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_a05.g1 MSMg01no083_a05.g1 CHROMAT_FILE:
MSMg01no083_a05.g1 PHD_FILE: MSMg01no083_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:37 2005
(418 letters)
>mm_chr6_77807155_77807972
Length = 818
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 83 ggtgggctaatgcccagggattactctgttaatttaataacgtcagaaaagacatatcag 142
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 818 ggtgggctaatgcccagggattactatgttaatttaataacatcagaaaagacatatcag 759
Query: 143 ctgctaaaagcaatcctgagatgaagtgtctttggtccttgccatgggactcaaccatca 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ctgctaaaagcaatcctgagatgaagtgtctttggtccttgccatgggactcaaccatca 699
Query: 203 cagatcatgcaaaaacagtgggccacctttaagggaagtcatctgctaagcctttaacct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cagatcatgcaaaaacagtgggccacctttaagggaagtcatctgctaagcctttaacct 639
Query: 263 tacctagatggcttctgacagatcacattaaccttaatcagtcagctttgtttagggatc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tacctagatggcttctgacagatcacattaaccttaatcagtcagctttgtttagggatc 579
Query: 323 tctatgacatgtggtatgttggaagtttaacagatcctatggaagtagatgctatgatct 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tctatgacatgtggtatgttggaagtttaacagatcctatggaagtagatgctatgatct 519
Query: 383 gtatttctaggcaaaagagaagaaagccataacata 418
||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtatttctaggcaaaagagaagaaagccataacata 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
