Query= MSMg01no083_c07.b1 MSMg01no083_c07.b1 CHROMAT_FILE:
MSMg01no083_c07.b1 PHD_FILE: MSMg01no083_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:47 2005
(466 letters)
>mm_chr6_80717947_80718812
Length = 866
Score = 837 bits (433), Expect = 0.0
Identities = 459/477 (96%), Gaps = 15/477 (3%)
Strand = Plus / Minus
Query: 5 gaattcaccaaatatcttggaaattttattaaaacagaaagtgtcttatgcataaaatat 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattcaccaaaaatattggaaattttattaaaacagaaagtgtcttatgcataaaatat 777
Query: 65 agagagctaagcaattaataaaatccatagtagaagccgggcgtggtggcacatgccttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 agagagctaagcaattaataaaatccatagtagaagccgggcgtggtggcacatgccttt 717
Query: 125 aatcccagcacttgggaggcagaggcaggcagctttctgagttcgaggccagcctggtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aatcccagcacttgggaggcagaggcaggcagctttctgagttcgaggccagcctggtct 657
Query: 185 acaaagtgagttccagaacaaccagggctatacagagaaaccctgtctcgaa-------- 236
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acaaagtgagttccagaacaaccagggctatacagagaaaccctgtctcgaaaaaacaaa 597
Query: 237 -------aaaacaaaacaaaacaaaacacccatggcagatatagtggcaatatattgaac 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 acaaaacaaaacaaaacaaaacaaaacacccatggcagatatagtggcaatatattgaac 537
Query: 290 actcaattatgctattaaaataatattagtgtacaaacacatgagtattcactggccaga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 actcaattatgctattaaaataatattagtgtacaaacacatgagtattcactggccaga 477
Query: 350 aatcatggaaatttactacggcatagcactcaggttcagttcctagcacctacatgagca 409
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aatcatggaaatttactacagcatagcactcaggttcagttcctagcacctacatgagca 417
Query: 410 agcatacaacatcctgtagcttcagttccaacgtatctgaggcccacttcttgattt 466
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcatacaacatcctgtagcttcagttccaacgtatctgaggcccacttcttgattt 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_c07.g1 MSMg01no083_c07.g1 CHROMAT_FILE:
MSMg01no083_c07.g1 PHD_FILE: MSMg01no083_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:47 2005
(548 letters)
>mm_chr6_80576452_80577400
Length = 949
Score = 919 bits (475), Expect = 0.0
Identities = 526/549 (95%), Gaps = 11/549 (2%)
Strand = Plus / Plus
Query: 1 taagctctgttaacttgacgaggaatcaccactaccacattactgacataaaatgttgta 60
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagctctgtcaacttgacgaagaatcaccactaccacattactgacataaaatgttgta 260
Query: 61 ccaggaaatgaatcattattgtctctgggtagaggagagcctgacccttgatctcttaat 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ccaggaaatgaatcattattgtctctgggtagagaagagcctgacccttgatctcttaat 320
Query: 121 attttttctcccattttatccgtttagctttactgattttcaaaccaattcttgatagct 180
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttttctcccattttatccatttagctttactgattttcaaaccaattcttgatagct 380
Query: 181 acagagtacttttaaatgaaaagatcactgaggagtcccaaaatatcattaaatttgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagagtacttttaaatgaaaagatcactgaggagtcccaaaatatcattaaatttgtaa 440
Query: 241 acttgagaggcataatggaaaaaa-tgtcaataaatggaatatggccatttatttgtgac 299
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 acttgagaggcgtaatggaaaaaaatgtcaataaatggaatatggccatttatttgtgac 500
Query: 300 ttttcaaccagtttcctaattagtattccattgatgccacgcgacagaaacccaatatat 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ttttcaaccagtttcctaattagtattccattgatgccacgtgacagaaacccaatatat 560
Query: 360 tggtgggtcggaacataaaaacactttgtcacctgaaatacatgacaattaggaaacaaa 419
|||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 tggtgggtaggaacataaaaac----------ctgaaatacatgacaattaggaaacaaa 610
Query: 420 accaaaagactgtcagctccttcaagaacaaatgcttccaccatttctttttgtcttcca 479
|||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 611 accaaaagactgacagctcctccaagaacaaatgcttccaccatttttttttgtcttcca 670
Query: 480 ttcggttgcttctgtccttgatatttgcttcattattttcaaaccaagtcttcataaatc 539
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 671 ttcggttgcttctgtccttgatatttgcttcattattttcaaaccaagtctttataaatc 730
Query: 540 acaatgatc 548
|||||||||
Sbjct: 731 acaatgatc 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 949
Length adjustment: 10
Effective length of query: 538
Effective length of database: 939
Effective search space: 505182
Effective search space used: 505182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
