XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTC
TCAAAGGTGCTAAGTCTAACAGAATATTGCAAAGTATAGCCATTTATATT
CATTTTTAATGTAGTTAAAACTTCCATTGAGCAGTAGTGTCATTTTATGA
AAGCTTACTTTATAGGTGATGGTTTTTTGCAGTGTCAATTAACTTTCTGA
CCGTCAGTACTCAAATCTCATTTGTAAAGAGAAATAAGGCAAGGCACAAA
CAATTAAAATTGGAAAGTAGATTGGTAGATTATTATGGCATTAAAGGAAT
ACCCTTGCAAAAGTTATCATTCATACTTACGAGATTTTCTTTTCTTAAAA
TTTTTATTTATTTATGAGTATGTGTGTATGAGTGTATGTTTGTATTTATT
TATGAGAATTTGTTTCTGCTACATGTGTTCAGGCAGTTGTAGAGTCCAGA
AGAAGATATTTGGTTCCTTGGAGCTGGAATTATACTCAGTATGAGTCACC
CATTGTATGTGCTAGGAATTAAACTAAGATCTTCTGGGAGTTGACCAATA
ACTCTTAACTGCTAATCCATCTTTCCAGCCCCCAACATACCTCTTAGAGT
TCCTTTATTGACCACTGCAACCTTAATGCTACATTTGGTAATATTCAGCT
TCTGAGATACCGTTATTTACTATTTTGTGGAAAGAAATAGCATAGAGATG
GGACTAAAAAGGAG

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATGAATTTCTTAGGCAAATGGATGGAATTAGAA
AATATCCTGAGAGAGGTAACCCAATCTCCTCAAAAAACACACATGTCATA
CATTCACTGATAAGTGGATATTAGCGCCAAAGCTTGATCCAATTCACAGA
CTGAATAAAGCTCAAGAAGAAGAAAGACCAAAGTGTGGATGCTTCAGTCC
TAGTTAGAAGGCGGAACAAAATACTCACTGGAGCAAATACAGAGACAAAG
TATAGAGCAGAGCCTGAAGGAAAGGCCATCCAGAGACTGCTCTACCTGGG
GATCCATCCCATATACAGTCACCAAACCCAGACACTATTGTAGATCCCAA
GAAGTGCATACTGACAGGAGCCTGATATAGCTGTCTCTTGAGATGCTGTG
CCAGTGCCTGACAAATTCAGAGGTGGATGCTCACAGCCAACCATTGGACT
GAGCAGGAAGTCCCCAATGGAGGAATTAGAGAAAAGACTGAAGGAGTTTT
CAACCCCATAGGAAGAAAAACAATGTCAACAAACCAGACCCCCTAGAGCT
CCCAGGGACTAATAGACCAACCAAGGAGTACACATGGAGGGACCCATGGC
TCTAGCAGCATATGTAGCAGAGGATGAATTTGTTGGAGAGGGGCTTGATC
CTGTGAAGGCTC

Query= MSMg01no083_p23.b1 MSMg01no083_p23.b1 CHROMAT_FILE:
MSMg01no083_p23.b1 PHD_FILE: MSMg01no083_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:54 2005
         (585 letters)



>mm_chr6_11068688_11069672
          Length = 985

 Score = 1100 bits (569), Expect = 0.0
 Identities = 578/581 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattctcaaaggtgctaagtctaacagaatattgcaaagtatagccatttatattcat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctcaaaggtgctaagtctaacagaatattgcaaagtatagccatttatattcat 264

                                                                       
Query: 65  ttttaatgtagttaaaacttccattgagcagtagtgtcattttatgaaagcttactttat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttaatgtagttaaaacttccattgagcagtagtgtcattttatgaaagcttactttat 324

                                                                       
Query: 125 aggtgatggttttttgcagtgtcaattaactttctgaccgtcagtactcaaatctcattt 184
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 aggtgatggttttttgcagtgtcaattaactttctgactgtcagtactcaaatctcattt 384

                                                                       
Query: 185 gtaaagagaaataaggcaaggcacaaacaattaaaattggaaagtagattggtagattat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaaagagaaataaggcaaggcacaaacaattaaaattggaaagtagattggtagattat 444

                                                                       
Query: 245 tatggcattaaaggaatacccttgcaaaagttatcattcatacttacgagattttctttt 304
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tatggcattaaaggaatacccttgcaaaagttatcattcatacttatgagattttctttt 504

                                                                       
Query: 305 cttaaaatttttatttatttatgagtatgtgtgtatgagtgtatgtttgtatttatttat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttaaaatttttatttatttatgagtatgtgtgtatgagtgtatgtttgtatttatttat 564

                                                                       
Query: 365 gagaatttgtttctgctacatgtgttcaggcagttgtagagtccagaagaagatatttgg 424
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagaatttgtgtctgctacatgtgttcaggcagttgtagagtccagaagaagatatttgg 624

                                                                       
Query: 425 ttccttggagctggaattatactcagtatgagtcacccattgtatgtgctaggaattaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttccttggagctggaattatactcagtatgagtcacccattgtatgtgctaggaattaaa 684

                                                                       
Query: 485 ctaagatcttctgggagttgaccaataactcttaactgctaatccatctttccagccccc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaagatcttctgggagttgaccaataactcttaactgctaatccatctttccagccccc 744

                                                    
Query: 545 aacatacctcttagagttcctttattgaccactgcaacctt 585
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aacatacctcttagagttcctttattgaccactgcaacctt 785


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)