BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-085G13.T7 (MSMg01no085_g13.b1) | MSMg01-085G13.TJ (MSMg01no085_g13.g1) |
ACC | AG305004 | AG305005 |
length | 1,248 | 1,327 |
length of high quality (start - end) | 80 (129 - 208) | 136 (123 - 258) |
definition | CHROMAT_FILE: MSMg01no085_g13.b1 PHD_FILE: MSMg01no085_g13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:09 2005 | CHROMAT_FILE: MSMg01no085_g13.g1 PHD_FILE: MSMg01no085_g13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:09 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATGGGCCTATAGACTCCTAAGGGAGAGGATCCGCGGAATTCTTATGTTC
TGGGCTACCCTTGAAATCCATGGTAAACAGCACCTGTGATTCCCTGGCCT
TAATTCTCACACCCGAACCAAAACAAACAAAAACAAACAAACATAAACCA
TAGGGTTTTTTGTTTGTTTGTTTGTTTTTTACTCCAAGTAATATCTGATG
TGATTACGTGTCAAGACACCTTTATAATGTGATTTTGACAAGTCATAGTG
GCCATAATAGAGTTCATACTCACAACAATCTTCATAATTGCCCATAACTG
GACACTCACAGATAATTAATATATATAAATAAATCCTAGGTTTGCTTTTA
TCCAGAAAGCCATCTCCAAGCAAACTTTTATGTGTTATGTATTTTTTTTT
GAATAGGTATTGCCACATTGTCATTTTGTTAGTTCTTTGTGCCCATTTTC
TCTCCTTATCTCTGATGATTGTTTATTTATATGCTCTTTCTATTTGTCTT
TTGTTTCTTTATTCTTTTTTGTTCTATTTTACATCTCTGTCATGTTTTAT
ATCCCTTATCTCTTTTTTTTTTTTTTTCTTTCTTTTTTCTTTTTTTCTTT
ATAATACCTCATTTTTCTTTTTTTTTTTTAAATTTTTTTCATCTTTTTAT
ATAATTTATCTTATTTTATTTCATTTCTTAATAATATATTTATTCTTCTT
TTTATTATTATTCTCTTTTTTTTTTCTTAATTATTTCTATCATTCTTTAA
TATTCTTTTTCTTATTTTTTTTTCATTATACTTTTTTTTTTTTTTTTTAT
TATTCTTTTTTTCTTTTTTCTTTTTTCTCTTCCTTATATTATTTTATTTT
TTTATTATTTTATCTTTTTTTTTTATTTTATTTTATTTTTTTCTTTTTAT
ATTTTTTCTATTATTTTTTTTTTTTTTTTTCTTTTATTTTTTTTTTCTTT
TTTTTTATTTTTTTTATCTTTTTATACTTTCTTTTTTTCTTATTATTTTT
ATTGTTTTCTTTTTTTATTTTTTTTTATTCCTTTATTTGCTTTTCTTCTT
TTTTTTTTTCTTTTTTTTCTTTTTTACTTCTTTAATTTTTTTTTTATCTT
TTTTTTCTTTTTCTATATTTATATTTTCTTTTCTTTATTTCTATTTTTTT
TTTCTATTTTTTTTTCTTTTTATTTTTTTTTTTATTATCTCTCTTTATCA
TTAACTATACTCTAATTTTTTTTCTCTTTTCATTTATTTTCTTATATA
| TAGTATGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCCCTTTTGGTATCACTATGCCTTTCTCCTGTTAGCGTT
CTGGCCGTAGGATGGGAGCCCCATTTGTTTTTCTTTTTAACTTAACCAGG
GAAAATGTACAGAAGTCATCAAGTATGTCGTCATCAGCTTCAGCTCAAAG
TTGGATTGGCATAAAGGCTTCATCTGTCCCCTTCAAGATTATTTGGAGCA
AATTGTATATAAGGTTTCCGGCGTGTGCGTGCGCGCGTGATTGCATGTGT
GCATCACATGTGCCTCCTTATTCCTTCCCCGTGAGCTTCCATCAGGCATC
TGAAGCTTCCTGGTACTACATTCTGTTAACATTATTTCAAGCTTATTTTT
TTTTTTGCATGTGACATCATATATGTATAACTTCTTTATTGTTTATCTTT
TCTCTTTTTCATTATTATTCTTCGATCCTTCTTGTATAGATGTTTCTCTC
TTTTATACTTTCTTTTTTCTCATATTTTATATTACCTTATATTTATCTAT
TTAATTTTCCTTTATTATTTCTTTTTTTTCATATTTCCTTTTTTTTATAA
TTCCTTTCTTTCTTTCTATTTTATCTATTCTATTTTTTCTTTCAATTTTA
TAGATTGCTTATTATTATTACTTTATTTTATTTCTTCTTTTCTTACTTTC
TTCTTTTAATTATTCTTTTTACCCTTTTTTTTATTTTTTACATTTTTTCT
CTTATTCTTTTTTCTTATATTCTTATTCCATCTCTTTAACCCCCTTTTTT
ATTATCCTTTCCTATTAATTTATTCATTTTCTTCTTTTTAATTTCATTTC
TTTATTCTTGTTTTTATATCTCTTTTATTAATTTATTTACCTTGTTTATT
TTTTCATATTTTTTCTCTATTTTTAATACTATTTTTATCTCTCTTCTCTT
TCTATTCTTATTTATCTCATTATTTCTTTAATATTTTATCCACTTTTCAT
TATTTTTATTACCTCTTTATTATTTTATCTTTATTAATATTTTCTAACTT
AATTCTAATCTTATTCTTTCGCTCTCTTTTTTTTTTTTTTATTATTTCTC
TCATTTTTACTTTCTATTCTTAATTTTATTATATTTTCTATTACTACTAT
TTCATTATCTTATTTTTACTATATTTCTTTTTCCTATTTATAACATATAA
TCAACTAATGTTCTTATATCCTTTTTTCTATTTTATTTCTATCTGTTATA
TATCTTTCCTATTTATTATTTCCTATTTATTTTTCCATTTCTTTACCTCT
TTTATACTGCTTTTTTCATTTTATTTT
|
quality values | Open.Hide. 8 8 10 8 9 9 9 9 8 10 10 8 8 8 12 9 9 8 8 8 8 19 14 25 16 24 24 32 32 37 37 37 36 31 28 19 14 14 19 28 30 30 37 37 37 37 30 31 23 24
22 28 28 24 15 14 10 10 12 12 12 10 10 10 13 18 15 13 12 12 14 10 12 12 10 12 19 32 41 28 28 28 31 33 28 35 35 35 31 31 33 37 37 26 25 11 11 11 8 8
8 8 8 8 12 15 18 18 12 10 10 10 11 11 16 14 19 18 21 18 21 21 24 20 18 21 15 17 17 24 25 33 39 35 35 31 31 23 23 23 31 28 42 39 36 35 35 35 37 40
34 25 25 31 41 41 48 59 57 59 57 48 48 47 47 47 47 39 44 22 19 12 19 12 15 24 32 39 46 57 46 57 36 36 28 28 32 36 37 37 30 30 18 17 17 32 32 43 38 35
30 23 30 23 36 19 19 14 27 19 19 16 11 15 15 24 27 17 17 32 38 50 52 44 43 43 36 15 14 14 24 24 43 50 44 43 32 28 19 30 21 28 28 32 24 16 11 11 13 11
11 11 12 12 17 10 10 10 10 10 10 12 13 10 10 10 10 10 13 19 15 15 20 20 20 23 23 28 28 24 28 22 22 18 21 21 21 23 34 19 13 13 19 19 23 23 23 18 18 12
12 10 10 11 20 21 14 14 12 20 9 9 9 13 13 16 10 8 6 6 8 8 8 10 10 10 13 15 24 15 11 11 11 13 10 10 10 13 13 26 28 28 29 25 25 25 33 27 25 11
11 11 11 9 11 11 16 20 14 14 13 13 13 23 19 19 15 15 11 11 11 12 10 12 19 13 15 15 20 15 14 11 13 17 28 28 20 17 10 9 9 9 12 19 13 11 12 8 12 11
16 8 8 8 8 8 8 8 8 8 10 10 10 11 10 8 10 10 8 8 8 8 8 8 8 8 11 10 8 8 8 8 8 10 10 13 13 15 12 12 11 11 10 9 9 15 23 28 16 17
10 11 11 16 16 12 15 8 9 10 13 17 26 20 11 10 8 8 8 8 8 8 10 9 10 8 10 10 10 10 12 10 10 10 10 11 12 8 8 8 8 8 12 10 8 8 8 10 10 10
9 10 10 9 9 9 9 10 17 10 10 10 10 10 10 12 11 11 8 8 8 8 8 8 8 8 10 10 10 10 11 9 9 8 8 8 8 8 8 9 9 9 9 10 12 16 16 11 13 11
10 11 14 15 9 13 12 9 9 9 9 10 12 22 16 10 8 8 8 8 8 10 10 10 10 13 8 8 8 8 7 7 12 8 9 8 10 8 8 8 8 10 10 11 14 10 10 8 8 8
6 8 8 8 8 8 8 8 8 6 6 8 13 14 8 8 8 8 10 8 10 9 9 9 10 11 12 13 15 15 12 12 12 16 15 14 11 8 8 8 8 9 16 11 16 8 11 7 7 10
8 9 8 8 10 11 8 8 8 8 10 7 8 8 8 8 8 8 8 8 8 8 8 10 13 10 8 8 12 8 8 6 8 8 8 9 9 9 10 10 9 9 9 10 10 10 10 9 9 8
8 9 12 10 11 11 8 8 7 7 8 8 8 8 8 8 8 10 10 8 8 8 10 8 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 8 8 6 6 8 8 9 8
8 8 8 8 12 12 19 10 10 10 8 8 8 8 8 8 8 8 8 9 9 6 8 6 6 8 8 8 6 6 6 8 8 11 12 13 11 13 11 15 9 9 9 9 9 12 10 10 10 10
8 9 8 8 8 8 10 10 8 8 8 8 11 10 10 11 9 11 11 11 10 12 12 10 10 8 8 6 6 7 6 9 9 9 9 9 9 11 8 8 6 6 8 8 8 8 8 8 8 8
8 8 8 8 8 8 7 7 10 10 8 8 8 8 9 13 13 12 10 9 10 8 8 8 8 8 8 8 8 8 8 15 11 6 6 8 8 10 10 10 10 8 9 6 10 8 10 6 7 6
6 8 10 12 10 9 9 9 12 8 8 9 7 10 8 10 10 10 10 13 14 13 13 13 17 11 11 8 12 8 8 8 8 10 10 10 10 16 13 16 23 19 22 10 12 8 8 8 8 8
10 10 13 8 8 6 6 8 8 10 14 12 13 12 10 10 8 11 10 10 10 10 8 8 8 9 8 10 8 8 8 8 8 8 10 12 13 8 8 8 8 12 14 10 11 10 10 10 10 10
8 8 6 6 8 8 11 11 11 12 15 12 9 8 8 8 8 8 8 9 11 12 12 12 8 8 8 8 8 8 10 10 8 10 9 9 8 7 9 9 11 10 8 8 8 8 8 8 8 8
8 9 10 10 10 10 10 8 8 8 9 11 8 10 10 8 10 10 8 8 9 13 15 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 10 9 8 8 8 8 8 8 8 8 8
10 15 15 13 12 8 8 8 13 13 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 19 14 9 10 9 9 9 8 8 8 6 6 8 8 8 15 13 10 10
10 9 8 8 8 8 8 8 13 14 11 13 10 13 8 8 8 8 8 8 7 9 8 8 13 10 10 10 9 13 8 10 8 9 8 10 8 8 8 9 9 9 10 8 8 8 8 8 8 6
6 6 6 8 8 6 7 6 6 9 8 8 10 10 8 8 8 9 15 20 13 10 6 6 8 8 8 6 7 6 6 8 8 12 6 9 8 10 8 8 6 7 8 8 8 8 8 8 | Open.Hide. 6 6 6 6 7 7 6 6 6 6 11 8 8 8 8 10 19 17 15 10 9 10 9 10 8 9 12 13 20 20 18 28 28 30 29 29 18 18 12 13 11 15 13 27 27 41 41 36 36 36
43 43 48 48 46 47 47 39 27 21 8 6 6 6 7 10 10 9 13 11 9 11 11 22 13 10 8 8 8 15 19 33 33 31 31 31 31 31 35 35 30 36 36 36 36 53 43 43 43 42
42 42 23 23 11 12 12 12 11 11 12 12 12 15 12 8 8 8 8 8 6 8 11 22 30 41 42 42 41 41 37 48 48 48 48 48 48 37 37 28 28 24 30 16 20 19 29 27 30 30
32 33 39 43 37 37 30 28 28 33 36 37 37 30 30 30 30 37 37 42 42 41 41 41 41 36 32 29 15 13 13 18 18 25 36 32 37 42 36 29 21 19 19 19 27 32 27 27 19 16
16 15 16 17 32 32 32 22 18 17 17 32 17 17 18 28 38 37 50 50 37 37 35 43 43 27 27 24 32 24 42 36 36 32 32 29 27 24 30 24 28 37 42 44 43 37 19 26 13 11
11 30 38 43 32 24 15 12 12 21 27 18 15 13 13 11 28 24 28 13 12 14 14 26 27 27 27 23 23 18 24 13 12 12 11 11 24 11 11 18 32 24 15 14 14 19 19 14 10 10
10 10 13 32 28 28 25 30 29 32 15 13 11 11 16 16 16 23 11 11 11 20 18 23 30 20 17 11 9 8 8 8 12 10 8 12 11 12 11 10 10 10 10 10 12 12 16 14 13 13
15 15 11 12 11 11 11 12 12 18 21 12 13 11 8 8 8 8 8 8 9 9 9 15 15 19 17 19 15 19 19 29 29 32 24 24 13 13 9 10 10 10 12 10 15 12 10 9 8 8
8 8 8 8 11 11 10 10 11 16 22 12 12 11 10 10 10 10 10 9 9 11 11 10 10 9 12 9 9 9 9 10 11 12 15 11 11 11 8 8 11 10 10 10 8 8 8 8 8 9
8 8 10 10 10 14 15 13 13 9 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 10 10 6 6 8 8 9 9 10 10 9 10 10 8 8 8 8 8 8 8 8 6 6 8 10
29 15 13 7 6 8 8 10 8 9 9 9 9 10 13 10 10 10 12 17 10 10 8 8 8 8 10 6 6 8 8 8 6 6 8 8 12 11 11 10 10 8 8 6 6 8 6 7 10 10
10 8 8 8 8 8 8 8 8 6 6 8 7 6 8 8 10 9 10 12 13 11 11 10 10 10 8 8 8 8 8 8 9 9 10 15 12 13 12 10 8 8 8 8 10 8 6 6 6 8
8 10 8 9 10 13 10 10 8 8 6 6 8 10 8 8 8 8 8 8 8 10 12 16 19 12 12 8 8 8 11 7 6 8 8 10 8 8 8 8 8 8 7 11 9 11 10 8 8 8
8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 9 10 10 9 9 9 9 9 10 12 10 10 14 8 8 6 6 6 6 10 10 7
6 8 8 11 8 8 8 8 8 8 6 6 8 8 11 11 18 11 11 11 9 8 11 6 7 8 8 8 8 9 9 10 10 10 10 8 12 8 8 6 6 8 8 10 13 13 21 10 8 10
8 8 8 8 8 8 10 10 10 10 6 6 6 6 8 6 8 6 6 8 8 7 7 8 8 15 11 11 9 9 9 9 11 11 11 12 12 10 9 8 12 8 7 6 8 9 9 8 8 8
8 8 10 10 10 8 9 10 13 9 8 8 8 12 11 8 9 9 9 9 11 11 12 16 11 9 9 9 12 12 12 11 10 10 10 10 10 8 8 8 8 8 8 6 6 8 8 8 8 8
8 10 9 9 9 9 9 9 10 10 11 10 10 10 10 10 10 10 11 11 11 15 11 13 13 11 11 10 8 8 6 6 8 8 9 8 8 8 8 8 8 8 9 11 8 13 10 10 10 22
13 14 12 16 8 8 6 6 8 8 10 10 10 10 10 8 8 8 8 8 13 8 11 11 9 8 8 6 6 8 8 8 10 10 15 11 11 11 8 8 6 6 10 8 8 8 7 7 10 11
10 10 8 8 9 10 9 8 8 8 8 8 8 8 8 8 6 6 8 8 10 8 10 10 11 9 7 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 11 11 11 11 11 10
10 10 10 10 10 11 9 8 8 6 6 6 6 6 6 6 8 8 10 8 8 8 8 8 10 6 6 8 8 12 12 10 8 8 6 6 8 8 10 10 9 10 10 10 10 8 8 6 6 8
8 8 8 8 8 8 8 8 10 12 8 9 9 8 7 7 8 8 10 8 8 8 8 8 6 6 8 10 11 15 11 13 13 12 9 9 8 8 8 8 8 8 8 8 10 12 10 10 8 8
7 6 6 8 10 18 15 8 8 6 6 8 8 8 8 10 10 8 8 6 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 10 6 6 8 8 8 8 8 6 6 8 8 10 8 8
8 9 8 8 8 10 10 11 10 12 9 7 8 8 8 12 8 8 8 8 8 8 8 8 8 8 6 6 8 8 11 11 11 11 11 11 11 11 8 8 8 8 8 8 8 8 6 6 8 7
6 8 8 6 6 8 8 8 8 6 6 6 6 6 7 10 8 8 6 6 8 8 8 8 12 14 8 8 8 8 8 8 12 8 10 10 10 12 12 8 8 8 8 8 6 6 8 8 6 6
8 8 8 8 8 11 8 8 6 7 8 10 12 11 11 11 15 15 10 8 8 10 8 7 7 12 12 8 8 9 10 10 8 8 8 8 8 8 8 8 10 10 10 10 9 9 9 9 9 9
11 10 6 6 6 6 8 10 10 10 9 12 9 11 8 8 6 6 8 8 8 6 6 8 8 8 6 |