Query= MSMg01no087_i04.b1 MSMg01no087_i04.b1 CHROMAT_FILE:
MSMg01no087_i04.b1 PHD_FILE: MSMg01no087_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:40 2005
(203 letters)
>mm_chr6_68024046_68024648
Length = 603
Score = 346 bits (179), Expect = e-100
Identities = 194/199 (97%)
Strand = Plus / Plus
Query: 5 gaattcaataattccttcccattttcaaatcctgaagttatcatataaaaatacatatct 64
||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaataactgcttcctattttcaaatcctgaagttatcatataaaaatacatatct 264
Query: 65 ataataaactgaccatactctgagcaaatgcaactctaactagtttcattggcaccctac 124
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataataaactgaaaatactctgagcaaatgcaactctaactagtttcattggcaccctac 324
Query: 125 ttgcctacaacattaatacatggcccattctcaaagcaagttgtgttctacttcagtgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcctacaacattaatacatggcccattctcaaagcaagttgtgttctacttcagtgat 384
Query: 185 ttcagatagaatatgaaag 203
|||||||||||||||||||
Sbjct: 385 ttcagatagaatatgaaag 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_i04.g1 MSMg01no087_i04.g1 CHROMAT_FILE:
MSMg01no087_i04.g1 PHD_FILE: MSMg01no087_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:40 2005
(160 letters)
>mm_chr6_68335933_68336492
Length = 560
Score = 207 bits (107), Expect = 3e-58
Identities = 148/163 (90%), Gaps = 6/163 (3%)
Strand = Plus / Minus
Query: 1 gttcacattcta-aaatataacagta--tttctgcaatagagaaagaaatatgcatgttg 57
|||||||||| | ||||||| | || ||||| ||||||||| ||||||||||||||||
Sbjct: 360 gttcacattc-agaaatatatc--tatgtttctccaatagagatagaaatatgcatgttg 304
Query: 58 ttttaattatatccattaatatgaatatatttcatgtactgacaccgtacatgtaagttc 117
|||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 303 ttttaattatatccattaatataaatatatttcatgtactgacaccatatatgtaggttt 244
Query: 118 tgattaagcactaaaattatgctcacaaatatatagtctatca 160
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 243 tgattaagcaccaaaattatgctcacaaatatatagtctatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
