Query= MSMg01no089_i07.b1 MSMg01no089_i07.b1 CHROMAT_FILE:
MSMg01no089_i07.b1 PHD_FILE: MSMg01no089_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:21 2005
(122 letters)
>mm_chr6_110646309_110646830
Length = 522
Score = 205 bits (106), Expect = 7e-58
Identities = 118/122 (96%)
Strand = Plus / Minus
Query: 1 ttcataaaatattacccattctgtaagcttatctctcatcaatggatgcatgatttaaat 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcataaaatatcagtcattctgtaagcttatctctcatcaatggatgcatgatttaaat 263
Query: 61 accatagtacatacaagcaatgaaagatcaaacagttgcagaataatatcctcaactata 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 262 accatagtacatacaagcaatgaaagatcaaacagttgcagaataaaatcctcaactata 203
Query: 121 ca 122
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 522
Length adjustment: 8
Effective length of query: 114
Effective length of database: 514
Effective search space: 58596
Effective search space used: 58596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_i07.g1 MSMg01no089_i07.g1 CHROMAT_FILE:
MSMg01no089_i07.g1 PHD_FILE: MSMg01no089_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:21 2005
(233 letters)
>mm_chr6_110506782_110507415
Length = 634
Score = 385 bits (199), Expect = e-111
Identities = 226/235 (96%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 1 tttt-aaactgatttaacgggtaaatgatgtttcagctacaaattttattgccacacaat 59
|||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaaaactgatttaatggggaaatgatgtttcagctacaaattttattgccacacaat 260
Query: 60 cacattttaaaatttatctgtgtctgcaagtgatgataatatctttttaaaattggctac 119
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cacatttttaaatttatctgtgtctgaaagtgatgataatatctttttaaaattggctac 320
Query: 120 tattgtaaaagaaatgtgctgtaaaagtgtgaggcacttaacttccttagagggcactt- 178
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgtaaaagaaatatgctgtaaaagtgtgaggcacttaacttccttagagggcacttt 380
Query: 179 cctgtttcagtttaccacatggctttttccatgaaacacctaaaactcacttgaa 233
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 cc-gtttcagtttaccacatggctttttccatgaaacacctaaaactcacatgaa 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 634
Length adjustment: 9
Effective length of query: 224
Effective length of database: 625
Effective search space: 140000
Effective search space used: 140000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
