Query= MSMg01no090_f17.b1 MSMg01no090_f17.b1 CHROMAT_FILE:
MSMg01no090_f17.b1 PHD_FILE: MSMg01no090_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:29 2005
(256 letters)
>mm_chr6_27392711_27393366
Length = 656
Score = 451 bits (233), Expect = e-131
Identities = 248/253 (98%)
Strand = Plus / Minus
Query: 4 ggaattctaggcatatgcacccaccacccagctgacatgctgggtttttaattgaaatat 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 314 ggaattctaggcatatgcacccaccacccagctgacatgctgagtttttaattgaaatat 255
Query: 64 ttttttgtttatttcattttggatatgctacagatttaaaatattaccttgtctagaacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 254 ttttttgtttatttcattttggatatgctacagatttaaaatattaccttgcctagaacc 195
Query: 124 ttactcattctaggcaaatgttctaccacagagctatatacataatcttgtgtttactat 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 194 ttactcattctaggcaaatgttctaccacagagctatatacataatcctgtgtttactat 135
Query: 184 ataagtctccaaaattaaagcttatcttttgataattttgtaaatttcactttatgaact 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 134 ataagtctccaaaattaaagcttatcttttgataattttgtaaattacactttatgaact 75
Query: 244 tacattttcaatt 256
||||| |||||||
Sbjct: 74 tacatgttcaatt 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_f17.g1 MSMg01no090_f17.g1 CHROMAT_FILE:
MSMg01no090_f17.g1 PHD_FILE: MSMg01no090_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:29 2005
(286 letters)
>mm_chr6_27334885_27335574
Length = 690
Score = 534 bits (276), Expect = e-156
Identities = 285/290 (98%), Gaps = 4/290 (1%)
Strand = Plus / Plus
Query: 1 tatgattgtccttaagtttttgtaattatcatcagtcattgtattcattgaaatactaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgattgtccttaagtttttgtaattatcatcagtcattgtattcattgaaatactaat 260
Query: 61 ttattcccagtgctttttgacaattcagattattaaataaaaatgctgctagcaatttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattcccagtgctttttgacaattcagattattaaataaaaatgctgctagcaatttgt 320
Query: 121 tacaaacgtttaacttttatagctatgtttgactt----gtttgtttgcatatatacaaa 176
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 321 tacaaacgtttaacttttatagctatgtttgacttaattgtttgtttgcatacatacaaa 380
Query: 177 tgtccaaatattttattcttcccaggctaagtgtgaatatgtattctctcatataaatta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtccaaatattttattcttcccaggctaagtgtgaatatgtattctctcatataaatta 440
Query: 237 tatgttgaatatcacattttaaattcttcacttaaaatgtggcaatgcct 286
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgttgaatatcacattttaaattcttcacttaaaatgtggcaatgcct 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 690
Length adjustment: 9
Effective length of query: 277
Effective length of database: 681
Effective search space: 188637
Effective search space used: 188637
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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