Query= MSMg01no091_f02.b1 MSMg01no091_f02.b1 CHROMAT_FILE:
MSMg01no091_f02.b1 PHD_FILE: MSMg01no091_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:47 2005
(293 letters)
>mm_chr6_93546903_93547595
Length = 693
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%), Gaps = 2/290 (0%)
Strand = Plus / Minus
Query: 5 gaattcaattcttc-taccaagtcatcaagtagccagctgtgtgtctctggttttcaatt 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaattcaattcttcaaaagaagtcatcaagtagccagctgtgtgtctctggttttcaatt 434
Query: 64 gcttccagcatgggcaaaaaaaaaatctatcatggagtctgaaaatttgagcttcataat 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttccagcatggg-aaaaaaaaaatctatcatggagtctgaaaatttgagcttcataat 375
Query: 124 ttggggttttcagtccccaaagcaaagctttctgagatctaatgtgccctacaggactgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttggggttttcagtccccaaagcaaagctttctgagatctaatgtgccctacaggactgg 315
Query: 184 cctccatagctcctgctgggaattgtcctttctcactttaaaaggcagaacagtattttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 314 cctccatagctcctgctgggaattgtcctttctcactttaaaaggcagaacagcattttc 255
Query: 244 cctataattctcagttttgattatccaaacacgtcaatatgtttctctgt 293
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cctataattctcagttttgattatccaaacacgtcaatatgtttctctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_f02.g1 MSMg01no091_f02.g1 CHROMAT_FILE:
MSMg01no091_f02.g1 PHD_FILE: MSMg01no091_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:47 2005
(250 letters)
>mm_chr6_93487026_93487675
Length = 650
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Plus
Query: 1 actgttgatgccaagcagaaaagccagtgccttagtgggcacccctcatgccactccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgttgatgccaagcagaaaagccagtgccttagtgggcacccctcatgccactccaca 260
Query: 61 cccttggtttgtgccagctccacaagtatgacctggagtggctctaatgggctactcttg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cccttggtttgtgccagctccacaagcatgacctggagtggctctaatgggctactcttg 320
Query: 121 aaattctttgaagtagaagtgacctctccaagaacatagatacttttaaaagtctcctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattctttgaagtagaagtgacctctccaagaacatagatacttttaaaagtctcctta 380
Query: 181 aagtgaagtctcctggagtcccaactcaacctagccaaaagatcctgtaagaacatagaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 381 aagtgaagtctcctggagtcccaactcaacctagtcaaaagatcctgtaagaacacagaa 440
Query: 241 gaggaggaa 249
|||||||||
Sbjct: 441 gaggaggaa 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
