Query= MSMg01no091_i09.b1 MSMg01no091_i09.b1 CHROMAT_FILE:
MSMg01no091_i09.b1 PHD_FILE: MSMg01no091_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:04 2005
(355 letters)
>mm_chr6_17997388_17998143
Length = 756
Score = 576 bits (298), Expect = e-169
Identities = 341/362 (94%), Gaps = 12/362 (3%)
Strand = Plus / Plus
Query: 1 cctgagagtgtagggtatccatgtgctgggtcctcaaagcaaactttttttttttctttt 60
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 190 cctgagagtgcagggtatccatgtactgggtcctcaaagcaaactttttttttttttttt 249
Query: 61 tttttttt-----------ggtgtctcgagacagggtttctctgtataaccctggctgtc 109
|||||||| |||||||||| |||||||||||||||||| |||||||||||
Sbjct: 250 tttttttttttttttttttggtgtctcgacacagggtttctctgtatagccctggctgtc 309
Query: 110 ctggaactcactttgtaaaacaggctggcctcgaactcagaaatccatctgcctctaagc 169
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctggaactcactttgtagaacaggctggcctcgaactcagaaatccatctgcctctaagc 369
Query: 170 aaactctttcaaatgagtttttagatgcttta-ctctcccatgagtctatggtggtgggt 228
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 370 aaactctttcaaatgagtttttagatgcttaaactctcccatgagtctatggtggtgggt 429
Query: 229 ctggacaattcccaagaaacttaaaatacccccctcttccgatggggctgctttctctta 288
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 430 ctggacaattcccaagaaacttaaaatacctccctcttccgatggggctgctttctctta 489
Query: 289 ctgtaacctctcacaactatgcattctttggccccaactttccatgcccctttctggcta 348
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 490 ctgtaacctctcacaactatgcattctttggccccaactttctatgcccctttctggcta 549
Query: 349 ac 350
||
Sbjct: 550 ac 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 756
Length adjustment: 9
Effective length of query: 346
Effective length of database: 747
Effective search space: 258462
Effective search space used: 258462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_i09.g1 MSMg01no091_i09.g1 CHROMAT_FILE:
MSMg01no091_i09.g1 PHD_FILE: MSMg01no091_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:04 2005
(290 letters)
>mm_chr6_18178655_18179344
Length = 690
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Minus
Query: 1 attgtctgctacttcttatgatccacttgcacctcacaattgttcttgccctgctttcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 attgtctgctacttcttatgatccacttgcacctcacaattgttcttgccttgctttcta 431
Query: 61 cagaatcaactcccttttttaatattatgccaatatcactaaggctccagaatatgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagaatcaactcccttttttaatattatgccaatatcactaaggctccagaatatgaaaa 371
Query: 121 ctcagacccaaacaatagtattaaaaggaatgatgatgtcttgaaacaagagagaaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctcagacccaaacaatagtattaaaaggaatgatgatgtcttgaaacaagagagaaccac 311
Query: 181 aaaagcaaaggttaaaatagtaagggaaaaaaggaagtaatgttgtatttcatctagatt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 310 aaaagcaaaggttaaaatagtaagggaaaaaaggaagtaacgttgtatttcatctagatt 251
Query: 241 tcaaatgtatgggtctatcttcacctttcataaacagtacttctaagttc 290
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 250 tcaaatgtatgggtctatcttcacctttcataaacagtagttctaagttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
