Query= MSMg01no092_g11.b1 MSMg01no092_g11.b1 CHROMAT_FILE:
MSMg01no092_g11.b1 PHD_FILE: MSMg01no092_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:15 2005
(175 letters)
>mm_chr6_51837978_51838552
Length = 575
Score = 317 bits (164), Expect = 2e-91
Identities = 170/172 (98%)
Strand = Plus / Plus
Query: 1 gactgtggatacatgataccacatggattcttgggactccaactttgtcaatgtacatgt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 gactgtggatacatgataccacatggattcttgggaccccaactttgtcaatgtacatgt 260
Query: 61 caaatgctttatctaactaaagtcaatctccctagccactgttactcctatgtattcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatgctttatctaactaaagtcaatctccctagccactgttactcctatgtattcttt 320
Query: 121 gtatctctcctccttggttgaaggttccaagttgctgatataaaaaaaaaaa 172
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 gtatctctcctccttggttgaaggttccaagttgttgatataaaaaaaaaaa 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_g11.g1 MSMg01no092_g11.g1 CHROMAT_FILE:
MSMg01no092_g11.g1 PHD_FILE: MSMg01no092_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:15 2005
(250 letters)
>mm_chr6_51927797_51928447
Length = 651
Score = 393 bits (203), Expect = e-114
Identities = 239/251 (95%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 1 tcttagaaaa-atacagaacttaacaaatgccatcatcaaatataaaacccaggggaagg 59
|||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 451 tcttagaaaacatacagaacttaacaaatgccatcatcaaatacaaaacaaagtggaagg 392
Query: 60 cagacagaaaaacaaaagtaacaccccctcaccgacagctcttccaaaacacacttcagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 391 tagacagaaaaacaaaagtaacaccccctcaccgacagctcttccaaaacacgcttcagt 332
Query: 120 gcttaccgcatatggattctctgtggctgggtcaaggttttagtactaggccagtgctga 179
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 331 gcttaccgcgtatggattctctgtggttgggtcaaggttttagtactaggccagtgctga 272
Query: 180 aaacagaaatcatgttctatcttttagttatatatcctatcattcacaagtaatgcttgg 239
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 271 aaacagaaattatgttctatcttttagttatatatcttatcattcacaagtaatgcttgg 212
Query: 240 actgtttaagc 250
|||||||||||
Sbjct: 211 actgtttaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 651
Length adjustment: 9
Effective length of query: 241
Effective length of database: 642
Effective search space: 154722
Effective search space used: 154722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
