Query= MSMg01no092_i02.b1 MSMg01no092_i02.b1 CHROMAT_FILE:
MSMg01no092_i02.b1 PHD_FILE: MSMg01no092_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:23 2005
(429 letters)
>mm_chr6_9505436_9506258
Length = 823
Score = 754 bits (390), Expect = 0.0
Identities = 410/420 (97%), Gaps = 6/420 (1%)
Strand = Plus / Minus
Query: 10 gaattctaccactctctcaccatatttggaagagacgattgtgtgtatatacttgcaaga 69
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaattctaccactctctcagcatatttggaagagacgattgtgtgtatatacttgcaaga 564
Query: 70 actatcaactgtgaaaagtcagtaagtatatttaaatgttatatttagatgccagttcaa 129
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actatcaactgtgaaaagtcggtaagtatatttaaatgttatatttagatgccagttcaa 504
Query: 130 actaaaagacaaaacactgtgaaattgtacaaaattatagatgtcactatatttcaactt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actaaaagacaaaacactgtgaaattgtacaaaattatagatgtcactatatttcaactt 444
Query: 190 ttcacacctacttacattttgttttctctaaaccaccatcatttgttcatttttctcttt 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcacacctacttacattttgttttctctaaaccaccatcatttgttcatttttctcttt 384
Query: 250 cctcacatttcctccatctttttccttttggttatcatacacaaatattagcagaaaagc 309
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 383 cctcacatttcctccatctttttcctttaggttatcatacacaaatattagcagaaaagc 324
Query: 310 atgcatgttttgtatttcaaaggttttctaccttggtaccttacacctaattattgttat 369
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 323 atgcatgttttgtatttcaaaggttttctaccttggtaccttacacct------tgttat 270
Query: 370 tctgctaactctacctccaaaattatgatttaatactaatcattaatagtactctttcat 429
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cctgctaactctacctccaaaattatgatttaatactaatcattaatagtactctttcat 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 823
Length adjustment: 9
Effective length of query: 420
Effective length of database: 814
Effective search space: 341880
Effective search space used: 341880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_i02.g1 MSMg01no092_i02.g1 CHROMAT_FILE:
MSMg01no092_i02.g1 PHD_FILE: MSMg01no092_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:23 2005
(314 letters)
>mm_chr6_9347807_9348521
Length = 715
Score = 565 bits (292), Expect = e-165
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 1 accccctttcttctt-antcaacgacctagccctgagaacacaatttcatggactgtttc 59
||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 accccctttcttcttaagtcaatgacctagccctgagaacacaatttcatggactgtttc 260
Query: 60 ttaggcaatattttcagagatgtcatgaggaactaggaaatgggcatcttgtgtgccagg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaggcaatattttcagagatgtcatgaggaactaggaaatgggcatcttgtgtgccagg 320
Query: 120 acgtcattcctaataacacagtgtctgaggaaatgaggctgggagagatggctagtatgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 acgtcattcctaataacacagtgtctgaggaaatgaggctgggagagatggctggtatgg 380
Query: 180 tggtgaaggacaggctggcccatctgtgaataatggtgactcaggggatgatgaccttca 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tggtgaaggacaggctggcccatctgtgaataatagtgactcaggggatgatgaccttca 440
Query: 240 gtcagaacagatctcccctcctcctcatctcaggatatgtgcaagggtaggtcggtcagg 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcagaactgatctcccctcctcctcatctcaggatatgtgcaagggtaggtcggtcagg 500
Query: 300 aacagttttgggagt 314
|||||||||||||||
Sbjct: 501 aacagttttgggagt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
