Query= MSMg01no092_p17.b1 MSMg01no092_p17.b1 CHROMAT_FILE:
MSMg01no092_p17.b1 PHD_FILE: MSMg01no092_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:01 2005
(363 letters)
>mm_chr6_128489256_128490016
Length = 761
Score = 584 bits (302), Expect = e-171
Identities = 346/364 (95%), Gaps = 8/364 (2%)
Strand = Plus / Plus
Query: 3 tgtgtgccaccacgtcgggcccaactgatttttaaaatgaccaaaagctctgaagtcacc 62
|||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgtgcgccaccacgcccggcccaactgatttttaaaatgaccaaaagctctgaagtcacc 262
Query: 63 ctctcaacccagtactcagtacatccatcccttaactcagagctcttttgtgcttcccac 122
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctctgaacccagtactcagtacatccatcccttaactcagagctcttttgtgcttcccac 322
Query: 123 ctgctgtgatttccggttgttccctgagagattg---tgttttactgtgtgtatttctgt 179
||||||||||||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 323 ctgctgtgatttccgattgttccctgagag---gccttgttttactgtgtgtatttctgt 379
Query: 180 tgagctgaaacagagtactttcctactttaatctaatctcctccacctccacttctattt 239
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 tgagctgaagcagagtactttcctactttaatc--atctcctccacctccacttctattt 437
Query: 240 cgctctgtttttgggattccagttctgtacagttcaggtgcccaaacttgacgttaaact 299
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 438 cgctctgtctttgggattccagttctgtacagttcaggtgcccaaacttgaggttaaact 497
Query: 300 tgacagaaatgaagcaaatcatttagttgctctcaaaaccctgagacttctataatggaa 359
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 498 tgacagaaatgaagcaaatcattcggttgctctcaaaaccctgagacttctataatggaa 557
Query: 360 acaa 363
||||
Sbjct: 558 acaa 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 761
Length adjustment: 9
Effective length of query: 354
Effective length of database: 752
Effective search space: 266208
Effective search space used: 266208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_p17.g1 MSMg01no092_p17.g1 CHROMAT_FILE:
MSMg01no092_p17.g1 PHD_FILE: MSMg01no092_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:01 2005
(364 letters)
>mm_chr6_128924732_128925505
Length = 774
Score = 327 bits (169), Expect = 7e-94
Identities = 318/375 (84%), Gaps = 22/375 (5%)
Strand = Plus / Plus
Query: 1 agaaatttgcatgaatctcaccagcaaatattatacaaagaggttatgaaaagctctcag 60
|||| ||||||||| |||||||||||||||||||||||||| ||| ||||| ||| ||||
Sbjct: 201 agaattttgcatgagtctcaccagcaaatattatacaaagatgttgtgaaaggctgtcag 260
Query: 61 gagacttctagagaagtgagaggaggaaag---agtagtgg-tagttgggggtctcttct 116
|| |||||||||||||||||||||||| | |||||||| | |||||| ||||| |||
Sbjct: 261 gaaacttctagagaagtgagaggagga--ggttagtagtggct-gttgggtgtctcctct 317
Query: 117 caaggga-----ccactccctgtagctctctgacctcaattgcattggcttacttgaagg 171
||| || ||||||||||||| |||||||| | |||||| ||||||| |||||
Sbjct: 318 caaatgaaactgccactccctgtagttctctgacttggtttgcataagcttactggaagg 377
Query: 172 cttagtttagggaatttt-gggtaagaagcccttgagacatttaat--ctgtgaaagtgg 228
||||||||||||| |||| |||||||||||||||| || |||| | |||| |||||||
Sbjct: 378 cttagtttagggactttttgggtaagaagcccttgggatattt--tgcctgttaaagtgg 435
Query: 229 catgagatagggcaagctgaggcttgtgttccgggctgtttcttgtgttgagagaaggtt 288
||||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||
Sbjct: 436 catgagatagggcaagcccaggcttgtgttctgagttgtttcttgtgttgagagaaggtt 495
Query: 289 taccttgccatcagctcagggatg---tttcaatgg-cgacaaatgtgtcattttcacac 344
||||||| |||||||| ||||| ||||||||| | |||||||| |||||||||||
Sbjct: 496 taccttgtcatcagcttggggataatatttcaatggtc-acaaatgtatcattttcacag 554
Query: 345 agatccttaaagctg 359
||||||||||||||
Sbjct: 555 ggatccttaaagctg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 774
Length adjustment: 9
Effective length of query: 355
Effective length of database: 765
Effective search space: 271575
Effective search space used: 271575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
