Query= MSMg01no094_e18.b1 MSMg01no094_e18.b1 CHROMAT_FILE:
MSMg01no094_e18.b1 PHD_FILE: MSMg01no094_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:53 2005
(295 letters)
>mm_chr6_100119347_100120041
Length = 695
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%)
Strand = Plus / Plus
Query: 1 cttcctatggcagaagctgctttgctgaaccagaggccatttggcaaggcctggatcctt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cttcctatggcagaagctgctttgctgaaccagaggccatttggcaagacctggatcctt 260
Query: 61 ctgcctgcaccaaccagagtctaccttactccagctctgctgcggctcggcgcccattgt 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 261 ctgcctgcaccaaccagagtctaccttactccagctctgctgcggttcggcgcccattat 320
Query: 121 aatccttggcttgtagggatacgactctacctgtcatcaactctattcaagactgcttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatccttggcttgtagggatacgactctacctgtcatcaactctattcaagactgcttat 380
Query: 181 gtctagatgttcccactaataaggacatcacacaagtggaggtgaagctcagtggtaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctagatgttcccactaataaggacatcacacaagtggaggtgaagctcagtggtaaaa 440
Query: 241 tgtttatcatgcacaaatccctgggttcagtcctcagaatcacgtgactgggtgt 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttatcatgcacaaatccctgggttcagtcctcagaatcacgtgactgggtgt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_e18.g1 MSMg01no094_e18.g1 CHROMAT_FILE:
MSMg01no094_e18.g1 PHD_FILE: MSMg01no094_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:53 2005
(639 letters)
>mm_chr6_100225481_100226520
Length = 1040
Score = 1222 bits (632), Expect = 0.0
Identities = 638/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 1 ttgac-cattcacttcatttctttagctatattttcatttcacgcagtgattgacactgt 59
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 840 ttgacacattcacttcatttctttagctatattttcatttcacgcagtgattgacactat 781
Query: 60 ggtggcaaaaatgagcccagtaaattatggcagttgtggatatgttatagtgttacccag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggtggcaaaaatgagcccagtaaattatggcagttgtggatatgttatagtgttacccag 721
Query: 120 agattgagagttggaatcctaaggtaaacaggtgaaatttctaagctgggttagatactg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agattgagagttggaatcctaaggtaaacaggtgaaatttctaagctgggttagatactg 661
Query: 180 ctttctcttttcctcttagccagcttacagtatctgttttatcttgtggttgaacaaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctttctcttttcctcttagccagcttacagtatctgttttatcttgtggttgaacaaaaa 601
Query: 240 gagaaaaaagaaaaacagtggaaggtatacagggatatgtaaaaaagcacctgagttaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gagaaaaaagaaaaacagtggaaggtatacagggatatgtaaaaaagcacctgagttaag 541
Query: 300 acttaatgtagttttctatacaattaaagagcatgaagcatatagttaaaaaatttagtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acttaatgtagttttctatacaattaaagagcatgaagcatatagttaaaaaatttagtg 481
Query: 360 gcctttggaaagacagagattaagggaatgctagtttcctcagcatgatgactcttaaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gcctttggaaagacagagattaagggaatgctagtttcctcagcatgatgactcttaaat 421
Query: 420 tgtggttagtcatagagagaacaaactgatgactgctttctaagaacagctcagatgttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgtggttagtcatagagagaacaaactgatgactgctttctaagaacagctcagatgttg 361
Query: 480 catgtagagtgtgaggtttgctagctcttctcttttatgagaactctgtttgctaccaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 catgtagagtgtgaggtttgctagctcttctcttttatgagaactctgtttgctaccaca 301
Query: 540 ggtactgaaagaatagaatatggcaagaagtcagactcttgactcaaactactttaagcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtactgaaagaatagaatatggcaagaagtcagactcttgactcaaactactttaagcc 241
Query: 600 cccaaatccagaaccctttagtggtctatatagcctgtaa 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cccaaatccagaaccctttagtggtctatatagcctgtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
