Query= MSMg01no095_l07.b1 MSMg01no095_l07.b1 CHROMAT_FILE:
MSMg01no095_l07.b1 PHD_FILE: MSMg01no095_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:49 2005
(557 letters)
>mm_chr6_32677419_32678375
Length = 957
Score = 1046 bits (541), Expect = 0.0
Identities = 550/553 (99%)
Strand = Plus / Plus
Query: 5 gaattctcatgtctcttaccttttccccaatatctctatagattttgccctatattttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatgtctcttaccttttccccaatatctctatagattttgccctatattttaa 264
Query: 65 aatatgctgttgatgttataaaccaagtttgttctaaacttatttcagtgatcaagattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatatgctgttgatgttataaaccaagtttgttctaaacttatttcagtgatcaagattc 324
Query: 125 tttaaatctctgagaactgttcctttctggtttttctccattacatggatgcagtagtgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaaatctctgagaactgttcctttctggtttttctccattacatggatgcagtagtgt 384
Query: 185 gtatgggaggggaccgtgtgagtctgagtctgcaagtacctttacacacatgtggaggtc 244
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 gtatgggaggggaccgtgtcagtctgagtctgcaggtacctttacacacatgtggaggtc 444
Query: 245 aaggtcagagaagaatagtcagtctttccgtattgttctctgctgccttattacactgag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggtcagagaagaatagtcagtctttccgtattgttctctgctgccttattacactgag 504
Query: 305 atgtgctctctcactaagctgggtactcactgcttctgctaggctggctaactcgtcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgtgctctctcactaagctgggtactcactgcttctgctaggctggctaactcgtcagc 564
Query: 365 aagttcctgagatctgcctggctctgctccccagggctggagttacagcctgcacagcca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagttcctgagatctgcctggctctgctccccagggctggagttacagcctgcacagcca 624
Query: 425 tgtacagttttagatgcattatacccttgaatcaagtgtataaattacatacgacttttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtacagttttagatgcattatacccttgaatcaagtgtataaattacatacgacttttc 684
Query: 485 tgatctaatttggttccaggggtgaggaggtcagtctgtttatcttgagtctgttctcct 544
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 685 tgatctaatttggttccaggggtgaggaggtcagtctgtttatcttgggtctgttctcct 744
Query: 545 ttcattcctttaa 557
|||||||||||||
Sbjct: 745 ttcattcctttaa 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_l07.g1 MSMg01no095_l07.g1 CHROMAT_FILE:
MSMg01no095_l07.g1 PHD_FILE: MSMg01no095_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:49 2005
(524 letters)
>mm_chr6_32756287_32757212
Length = 926
Score = 982 bits (508), Expect = 0.0
Identities = 521/526 (99%), Gaps = 2/526 (0%)
Strand = Plus / Minus
Query: 1 agtgaaaagttcccaatgatttccataagcc--aaaaaaaaaaatgttttgttattgttt 58
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 726 agtgaaaagttcccaatgatttccataagccaaaaaaaaaaaaatgttttgttattgttt 667
Query: 59 tttataaatgtctattttcagaggttgactttgttctaacagttccttctggctcaactg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tttataaatgtctattttcagaggttgactttgttctaacagttccttctggctcaactg 607
Query: 119 gttttggataatggtctccattatcactgtcctgtgttttccagctctgtgctcaacttg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gttttggataatggtctccattatcactgtcctgtgttttccagctctgtgctcaacttg 547
Query: 179 ctctttatcttgtcattcatcctttcattcaatctttcttaaatccagtaaaattcaatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctctttatcttgtcattcatcctttcattcaatctttcttaaatccagtaaaattcaatt 487
Query: 239 gtttaaatgtccttttcaactaagatttcattttctcacctaaatatcttggaattctgc 298
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 486 gtttaaatgtccttttcaactaagatagcattttctcacctaaatatcttggaattctgc 427
Query: 299 cttttcttatttttgcctaatagaggcattttccttcagtaggcatgaaagcagtcatta 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 426 cttttcttatttttgcctaatagaggcattttccttcagtaggcatgaaagcagtcataa 367
Query: 359 aagtcaattgctgattctatgattatatgaagggctgctcacaatgcatattggagagat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aagtcaattgctgattctatgattatatgaagggctgctcacaatgcatattggagagat 307
Query: 419 gtctttgaagcccttttcctgaatggaaggtgccagggcttgtgctttatggccttctaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtctttgaagcccttttcctgaatggaaggtgccagggcttgtgctttatggccttctaa 247
Query: 479 tgttggatagtaatctcatttagcatcttccagagtgaaaacagtg 524
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgttggatagtaatctcatttagcatcttccagagtgaaaacagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 926
Length adjustment: 10
Effective length of query: 514
Effective length of database: 916
Effective search space: 470824
Effective search space used: 470824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
