Query= MSMg01no098_f13.b1 MSMg01no098_f13.b1 CHROMAT_FILE:
MSMg01no098_f13.b1 PHD_FILE: MSMg01no098_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:25 2005
(420 letters)
>mm_chr6_73042576_73043395
Length = 820
Score = 781 bits (404), Expect = 0.0
Identities = 416/420 (99%)
Strand = Plus / Minus
Query: 1 acttataaaacccaaactaacaaaaggaaaggttaaacattactaaagtcatacttgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acttataaaacccaaactaacaaaaggaaaggttaaacattactaaagtcatacttgacc 503
Query: 61 taaatgagaagtagttgatatttacccactttgttaatctcactcctgggaatttggtcg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 taaatgagaagtagttgatatttacgcactttgttaatctcactcctgggaatttggtcg 443
Query: 121 gtgaaaataatttgctcccagctgagaagcaaagctttagacctaaagatggattggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgaaaataatttgctcccagctgagaagcaaagctttagacctaaagatggattggtag 383
Query: 181 cagaaactaaattgccaaccatttatgctcatggaaactcaaggcactttgcctacaagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 382 tagaaactaaattgccaaccatttatgctcatggaaactcaaggcactttgtctacaagg 323
Query: 241 aatgttgttttcccacaagatgaacattctacagaagcgtggcttaatattcatagtaaa 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 322 aatgttgttttcccacaagatgaacattctacagaagtgtggcttaatattcatagtaaa 263
Query: 301 atcatcactgaatggagcagactataagatacttgtacaaatgattttgatgggtaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atcatcactgaatggagcagactataagatacttgtacaaatgattttgatgggtaaaat 203
Query: 361 gatgtgttagtaagttttaactgttaaattgacacactctagtatcacctgaaaaagagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gatgtgttagtaagttttaactgttaaattgacacactctagtatcacctgaaaaagagt 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_f13.g1 MSMg01no098_f13.g1 CHROMAT_FILE:
MSMg01no098_f13.g1 PHD_FILE: MSMg01no098_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:25 2005
(366 letters)
>mm_chr6_72868014_72868778
Length = 765
Score = 679 bits (351), Expect = 0.0
Identities = 363/367 (98%), Gaps = 2/367 (0%)
Strand = Plus / Plus
Query: 1 tccgatcccctgtaaa-ggtgttacaaataaatggttatgagacaatgtgtgggtgccag 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tccgatcccctgtaactggtgttacaaataaatggttatgagacaatgtgtgggtgccag 259
Query: 60 gaatggagctgggcccccagcaatagcaacaagagctcctaacaagagctatctctctag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaatggagctgggcccccagcaatagcaacaagagctcctaacaagagctatctctctag 319
Query: 120 ctttgggtagcttgttttatagagaaaacaaattttttttaattgagagaggattgcact 179
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 320 ctttgggtagcttgttttatagagaaaacaaattttttt-aattgagagaggattgcact 378
Query: 180 tctcacactggttaagtaaccaagaacgatcatttagactcccaatacccctgcctctgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctcacactggttaagtaaccaagaacgatcatttagactcccaatacccctgcctctgc 438
Query: 240 tttctaagtgctatcattacaagtgtgcagtcttacactgttactggaattttgggggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttctaagtgctatcattacaagtgtgcagtcttacactgttactggaattttgggggtc 498
Query: 300 cttggtctcattgataaaagcagttaagagttgacttaagttaaagcccatagggtttaa 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttagtctcattgataaaagcagttaagagttgacttaagttaaagcccatagggtttaa 558
Query: 360 aagacag 366
|||||||
Sbjct: 559 aagacag 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
