XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGGTA
TACCTGACTTGTATCTCAGGGAAACAATGTACTTGAAACTCTCACTGCAA
ACACTGACCAATGGTGAGGCAAATATTAAGTGAAGAAGTATTTGCATACT
GCTATATATTTATAAAAAACACATATTTAGAGACACTGTAAAGATAAGAA
CTAAATCTGAACCTAGACTCTCCAATCCCCTGAGTCCATTAAATACAAAC
TATTATGAGAAATTGAAGACTGTTTCAAATCCAAGGTAACCATGGTAACA
TCAAACCTCAATCCCAGAGCAAATCCTAATATATGACTATACAACTCTAC
AGTAAGTCCTTGCAAAAGAAAGAAGTGGATATCAAATGGGAAGAATAAAG
CAATTTATGTCATACCATACTATCTTATGGAAAATGAATGTGTTTTAACA
AAAGTGATAAATGATACAAAAAGAAAAAAGTCATACTCTGGATAGATTTT
TTTTTCACAAAGTCTACATAACTAACTTTAGATACTATGGTGCTCATTGG
AATGCTATCACAAGAACTTCACAACAGCCATGATTATTGTCCTAGATATG
AGTGAACATGAGAATTATTCAGAAGACCAAGTCTTGGAAAGGGAACAAGA
GCAAATAACATGGACGAATGATGAGGCTAACAGTCTCCTGGGCTACTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCCTCTGAAGAACAGACTGGGAGGAAGAAGCAGCTCATTATGAGA
AAAAAGGGTACCAGCCAGGTAAAGTGCTAGCTAATCAGTTAAGGAAGCCA
AAAGCGGCTGGCGAAGGCCAGTTTGCTGATTGGCCTCAGGGCAGTCGGCT
TCAAGGTCCGCCCTATGCGGAGTCCCCGCCCTGCGTAGTGCGTCAGCCCT
GCGCAGAGAGACAATGCGCAGAGAGGCAATGCGCAGACTCATTCATTCCC
AGAGAGGAACAAAGGAAAATACAACAGGCATTTCCAGTCTTTGAAGGAGC
CGAGGGTGGGCGTGTCCACGCTCCGGTAGAATACGTACAGATTAAAGAAC
TTGCCGAGTCGGTCCGTAAATACGGAACCAATGCTAATTTTACCTTGGTG
CAGTTAGACAGGCTCGCCGGCATGGCACTAACTCCTGCTGACTGGCAAAT
GATTGTAAAAGCCGCTCTCCCTAGTATGGGCAAATATATGGAATGGAGAG
CTCTTTGGCATGAAACTGCACAAGCGCAGGCCCGAGCAAACGCAGCTGCT
TTGACTCCAGAGCAGAGAGATTGGACTTTTGACTTGTTAACGGGTCAGGG
AGCTTATTCTGCTGATCAGACAAACTACCATTGGGGAGCTTATG

Query= MSMg01no098_p07.b1 MSMg01no098_p07.b1 CHROMAT_FILE:
MSMg01no098_p07.b1 PHD_FILE: MSMg01no098_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:13 2005
         (598 letters)



>mm_chr6_36194526_36195518
          Length = 993

 Score =  843 bits (436), Expect = 0.0
 Identities = 454/462 (98%), Gaps = 5/462 (1%)
 Strand = Plus / Minus

                                                                       
Query: 135 cacatatttagagacactgtaaagataagaactaaatctgaacctagactctccaatccc 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 cacatatttagagacactgtaaagataagaactaaatctgaacctagactctccaatccc 934

                                                                       
Query: 195 ctgagtccattaaatacaaactattatgagaaattgaagactgtttcaaatccaaggtaa 254
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 cagagtccattaaatacaaactattatgagaaattgaagactgtttcaaatccaaggtaa 874

                                                                       
Query: 255 ccatggtaacatcaaacctcaatcccagagcaaatcctaatatatgactatacaactcta 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ccatggtaacatcaaacctcaatcccagagcaaatcctaatatatgactatacaactcta 814

                                                                       
Query: 315 cagtaagtccttgcaaaagaaagaagtggatatcaaatgggaagaataaagcaatttatg 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 813 cagtaagtccttgcaaaagaaagaagtggatatcaaatgggaagaataaagcaattcatg 754

                                                                       
Query: 375 tcataccatactatcttatggaaaatgaatgtgttttaacaaaagtgataaatgatacaa 434
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 753 tcataccatactatcttatggaaaatgaatgtgttttaacaaaagtg----atgatacaa 698

                                                                       
Query: 435 aaagaaaaaagtcatactctggatagatttttttttcacaaagtctacataactaacttt 494
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 697 aaagaaaaaagtcatactctggataga-ttttttttcacaaagtctacataactaacttt 639

                                                                       
Query: 495 agatactatggtgctcattggaatgctatcacaagaacttcacaacagccatgattattg 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agatactatggtgctcattggaatgctatcacaagaacttcacaacagccatgattattg 579

                                                     
Query: 555 tcctagatatgagtgaacatgagaattattcagaagaccaag 596
           ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 578 tcctagatatgagtgaacatgagaattgttcagaagaccaag 537


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 993
Length adjustment: 10
Effective length of query: 588
Effective length of database: 983
Effective search space:   578004
Effective search space used:   578004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)