Query= MSMg01no099_a12.b1 MSMg01no099_a12.b1 CHROMAT_FILE:
MSMg01no099_a12.b1 PHD_FILE: MSMg01no099_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:19 2005
(308 letters)
>mm_chr6_39286084_39286791
Length = 708
Score = 497 bits (257), Expect = e-145
Identities = 288/307 (93%), Gaps = 14/307 (4%)
Strand = Plus / Plus
Query: 1 cacactacaatcttctaaagggcaggcctaaggccctaacaatccactaccatgattcaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 215 cacactacaatcttctaaagggcaggcctcaggccctaacaatccactaacatgattcaa 274
Query: 61 tacatacacttcacacccccaggacaaagagcctttgtcttttctctaatcgtggtccat 120
||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 275 tacatacacttcatacccccagaacaaagagcctttgtctt--------------tccat 320
Query: 121 cttctgctgagggaactccaggaacctggctgcggctgtgacagagaccaatcttccaac 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctgctgagggaacttcaggaacctggctgcggctgtgacagagaccaatcttccaac 380
Query: 181 aataaggctacatagaacagcttctcagagggtcttgtcgttcccagactgtgaacgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaggctacatagaacagcttctcagagggtcttgtcgttcccagactgtgaacgtgg 440
Query: 241 gtttgaaagctccatactggaatgtctgaaatataatagtccacaaacagaagactgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgaaagctccatactggaatgtctgaaatataatagtccacaaacagaagactgctc 500
Query: 301 ctaggag 307
|||||||
Sbjct: 501 ctaggag 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_a12.g1 MSMg01no099_a12.g1 CHROMAT_FILE:
MSMg01no099_a12.g1 PHD_FILE: MSMg01no099_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:19 2005
(246 letters)
>mm_chr6_39428428_39429073
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 1 atcagggggctggggaggggtcagcaatcccgccctgtgctcaatgcatccatctggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcagggggctggggaggggtcagcaatcccgccctgtgctcaatgcatccatctggtca 387
Query: 61 cctttaggatgctcctctttggaccgttgccatttggctattccccggctgcccctacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cctttaggatgctcctctttggaccgttgccatttggctattccccggctgcccctacct 327
Query: 121 catgtctgagctctctgttcacttttaaatgtcaccatcattgttccctgtgcatttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 catgtctgagctctctgttcacttttaaatgtcaccatcattgttccctgtgcatttctg 267
Query: 181 ttagctcaggaagcagaccctgtcttcagcctgcagctggtgctaagagccgggcagctc 240
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttagctcgggaagcaggccctgtcttcagcctgcagctggtgctaagagccgggcagctc 207
Query: 241 tccaag 246
||||||
Sbjct: 206 tccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
