Query= MSMg01no099_h17.b1 MSMg01no099_h17.b1 CHROMAT_FILE:
MSMg01no099_h17.b1 PHD_FILE: MSMg01no099_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:59 2005
(596 letters)
>mm_chr6_68555516_68556511
Length = 996
Score = 1100 bits (569), Expect = 0.0
Identities = 587/593 (98%)
Strand = Plus / Plus
Query: 4 ggaattcagcatagtgacacactgttggcttattcaaacatcagcagaaaaattacacgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcatagtgacacactgttggcttattcaaacatcagcagaaaaattacacgt 263
Query: 64 acatgcaggtcaaggtgtcagcagcaaaagaatatgtgcaggagttctgtgagttggatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acatgcaggtcaaggtgtcagcagcaaaagaatatgtgcaggagttctgtgagttggatg 323
Query: 124 tttatcaatgctagcagagtatatggtcagtttataactttaaactgtatcaaagggcaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttatcaatgctagcagagtatatggtcagtttataactttaaactgtatcaaagggcaa 383
Query: 184 tgggcagagggaggtgccaggtaagatgattgttgactcagttcaaatagccctgttatg 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 tgggcagagggaggtgccaggtaagatgattgttgactcagttaaaatagccctgttatg 443
Query: 244 tcctcacattcctttttatctttatggtcaagctgttcccaggaatgcccgtgtttcgtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcctcacattcctttttatctttatggtcaagctgttcccaggaatgcccgtgtttcgtt 503
Query: 304 ccctttgttctcagccccaggcagcctcgaggctcacaaagaactagcaatttctgagta 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctttgttctcagccccaggcagcctcgaggctcacaaagaactagcaatttctgagta 563
Query: 364 ctttatatgacttacaggcaggtctttaaatttcatctttcttttaacatcacatcttag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctttatatgacttacaggcaggtctttaaatttcatctttcttttaacatcacatcttag 623
Query: 424 tgaaaatgatctgagttaatttgttttagatactgagagtgtcaatcaacaacctgcctg 483
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 tgaaaatgatctgagttaatttgttttaaatactgagagtgtcaatcaacaacctgcctg 683
Query: 484 tttttttctctgagtttattttgtctccctctgctggtcacctgataaaatgtcaatgtc 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gttttttctctgagtttattttgtctccctctgctggtcacctgataaaatgtcaatgtc 743
Query: 544 aatagacatttgtccatgattcctgtatacaggattgagcagtgtgaataatt 596
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 744 aatagacatttgtccatgattcctgtatacgggattgagcagtgtgaataatt 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_h17.g1 MSMg01no099_h17.g1 CHROMAT_FILE:
MSMg01no099_h17.g1 PHD_FILE: MSMg01no099_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:00 2005
(520 letters)
>mm_chr6_68622310_68623229
Length = 920
Score = 665 bits (344), Expect = 0.0
Identities = 480/534 (89%), Gaps = 21/534 (3%)
Strand = Plus / Plus
Query: 1 tctaaacctacagaggtcttatttacttaaatattttctttatttacatttcaaatgtta 60
||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 194 tctaaacctacagagttctta-ttaaataaatattttctttatttacatttcaaatgttg 252
Query: 61 t--------ctggttcccctccaaaag--ccccctttctctgttccatccctccctc--c 108
| ||||||| |||||||||| ||||| |||||||||| | ||||| | |
Sbjct: 253 tctcctttcctggttctcctccaaaagacccccc--tctctgttcc--ctctccccccac 308
Query: 109 cccagcttaacaacccacccactcctacttcaggg--ccctggcattcccctacactagg 166
||| ||||| ||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 309 ccctgcttaccaacccacccactcctaatt--ggggaccctggcattcccctacactagg 366
Query: 167 acatagagccttcataggaccaacggcctctcctcccattgatgaccaactaggccatcc 226
| |||||||||||| |||||||| || |||||||||||||||||||||||||||||| ||
Sbjct: 367 atatagagccttcacaggaccaagggtctctcctcccattgatgaccaactaggccaccc 426
Query: 227 tctgttaaatatgcagctggagccatgagtcccaccatgtgtactctttggttggtggtt 286
|||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctgctacatatgcagctgtagctatgagtcccaccatgtgtactctttggttggtggtt 486
Query: 287 tagtctccaggcccccagcgacttacagatctattgcagagcttataaaaggcctgtgag 346
|||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 487 tagtctccaggcccccagggacttgcagatccattgcagagcttataaagggcctgtgag 546
Query: 347 cagaatgatggctaccagattactttttaaatgtctctgccttgctaatattgctggatg 406
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cagaattatggctaccagaacactttttaaatgtctctgccttgctaatattgctggatg 606
Query: 407 ctgcttaatgggattttgctctgaaaaaaaggagcagaaggctaggtgtgcagatgaatc 466
||||||||||||| ||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 607 ctgcttaatgggagtttgctctgaacaaaaggagcagaagactaggtgttcaaatgaatc 666
Query: 467 tgccattgccatggaaacaacagcgttgtctctagagtgaattcccttatgggc 520
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 667 tgccattgccatggaaacaacagcgttgtctctagagtgaatcccctaatgggc 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
