Query= MSMg01no099_j21.b1 MSMg01no099_j21.b1 CHROMAT_FILE:
MSMg01no099_j21.b1 PHD_FILE: MSMg01no099_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:11 2005
(240 letters)
>mm_chr6_128710103_128710742
Length = 640
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 1 aaaccgaactcttggcggcgaccatttctcgccggccgactactgatcgctgcttcgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaccgaactcttggcggcgaccatttctcgccggccgactactgatcgctgcttcgccc 260
Query: 61 gtgtaacactagcaaaatggagcagaagggtcgggagaactgaggac-tcggattggaag 119
||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct: 261 gtgtaacactagcaaaatggaacagaagggtcgggagaactgaggacat-ggattggaag 319
Query: 120 aagggggtcgtgtcaggacggaagcgtggcgtggggagaagacaggagggtcgggcgtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagggggtcgtgtcaggacggaagcgtggcgtggggagaagacaggagggtcgggcgtgt 379
Query: 180 gcagctctgcgcggacaagagcgtgtgagctgcactggtgcctatgcgcccggaggacgc 239
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 gcagctctgcgtggacaagagcgtgtgagctgcactggtgcctatgcgcccgaaggacgc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_j21.g1 MSMg01no099_j21.g1 CHROMAT_FILE:
MSMg01no099_j21.g1 PHD_FILE: MSMg01no099_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:11 2005
(289 letters)
>mm_chr6_128759965_128760653
Length = 689
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 atcatttacagtctctgctttccttcccaagtgttatttattaaaatgattttgatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atcatttacagtctctgctttccttcccaagtgttatttattaaaatgattttgatgcag 577
Query: 61 ggcctggagacccatgccagagataacaacatcgagggaggaggctcaagagttcaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ggcctggagacccatgccagagataacaacatcgagggaggaggctcaagagttcaagcc 517
Query: 121 caggctgggctacatagctagagcttgtctccggaagctaaagcccaacaaaactaacgc 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 516 caggctgggctacatagctagagtttgtctccggaagctaaagcccaacaaaactaacgc 457
Query: 181 tttggggatgaacttgaactaatttccaaaagccctccagccttgatggtggaaaatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 456 tttggggatgaacttgaactaatttccaaaagccctccagccttgatggtgaaaaatgtg 397
Query: 241 atcattgaccaggacctggtctttttcttgctagtatcaacagta 285
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 396 atcattgaccaggacctggtctttttcttgctaatatcaacagta 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
