Query= MSMg01no101_b20.b1 MSMg01no101_b20.b1 CHROMAT_FILE:
MSMg01no101_b20.b1 PHD_FILE: MSMg01no101_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:12 2005
(304 letters)
>mm_chr6_73042629_73043332
Length = 704
Score = 557 bits (288), Expect = e-163
Identities = 300/304 (98%)
Strand = Plus / Minus
Query: 1 taaaacccaaactaacaaaaggaaaggttaaacattactaaagtcatacttgacctaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaaacccaaactaacaaaaggaaaggttaaacattactaaagtcatacttgacctaaat 445
Query: 61 gagaagtagttgatatttacccactttgttaatctcactcctgggaatttggtcggtgaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagaagtagttgatatttacgcactttgttaatctcactcctgggaatttggtcggtgaa 385
Query: 121 aataatttgctcccagctgagaagcaaagctttagacctaaagatggattggtagtagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aataatttgctcccagctgagaagcaaagctttagacctaaagatggattggtagtagaa 325
Query: 181 actaaattgccaaccatttatgctcatggaaactcaaggcactttgcctacaaggaatgt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 actaaattgccaaccatttatgctcatggaaactcaaggcactttgtctacaaggaatgt 265
Query: 241 tgttttcccacaagatgttcattctacagaagtgtggcttaatattcatagtaaaatcat 300
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttttcccacaagatgaacattctacagaagtgtggcttaatattcatagtaaaatcat 205
Query: 301 cact 304
||||
Sbjct: 204 cact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_b20.g1 MSMg01no101_b20.g1 CHROMAT_FILE:
MSMg01no101_b20.g1 PHD_FILE: MSMg01no101_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:12 2005
(249 letters)
>mm_chr6_72868017_72868664
Length = 648
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 1 atcccctgtaacaggtgttacaaataaatggttatgagacaatgtgtgggtgccaggaat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcccctgtaactggtgttacaaataaatggttatgagacaatgtgtgggtgccaggaat 260
Query: 61 ggagctgggtccccagcaatagcaacaagagctcctaacaagagctatctctctagcttt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagctgggcccccagcaatagcaacaagagctcctaacaagagctatctctctagcttt 320
Query: 121 gggtagcttgttttatagagaaaacaaattttttttaattgagagaggattgcacttctc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gggtagcttgttttatagagaaaacaaattttttt-aattgagagaggattgcacttctc 379
Query: 181 acactggttaagtaaccaagaacgatcatttagactcccaatacccctgcctctgctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acactggttaagtaaccaagaacgatcatttagactcccaatacccctgcctctgctttc 439
Query: 241 taagtgcta 249
|||||||||
Sbjct: 440 taagtgcta 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
